RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 THYN1Q9P016 225 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 ANKRD34BA5PLL1 514 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 HOXA1P49639 335 aaPredicted RBP9.61□□□□□ -0.87
DDX56-209ENST00000473924 DEFA1P59665 94 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 DEFA3P59666 94 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 DHRS2Q13268 280 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 C15orf32Q32M92 178 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 SLC25A24Q6NUK1 477 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 Q6ZRM9 215 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 LYG2Q86SG7 212 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 LRTM2Q8N967 370 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 COQ8AQ8NI60 647 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 P2RX4Q99571 388 aa9.61□□□□□ -0.87
DDX56-209ENST00000473924 RANGRFQ9HD47 186 aaPredicted RBP9.61□□□□□ -0.87
DDX56-209ENST00000473924 WNK1Q9H4A3 2382 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 IGHV4OR15-8A0A075B7B6 117 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 A0A087WW49 117 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 LINC01619G3V211 115 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 NDUFB8O95169 186 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
DDX56-209ENST00000473924 H2AFB2P0C5Z0 115 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 OR8U8P0C7N1 319 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 SNCAP37840 140 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 SPCS3P61009 180 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 IFITM3Q01628 133 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 EXOSC2Q13868 293 aaKnown RBP9.6□□□□□ -0.87
DDX56-209ENST00000473924 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 NMSQ5H8A3 153 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 OR1S1Q8NH92 325 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 FANCD2OSQ96PS1 177 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 PEF1Q9UBV8 284 aaKnown RBP9.6□□□□□ -0.87
DDX56-209ENST00000473924 CACFD1Q9UGQ2 172 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
DDX56-209ENST00000473924 F11RQ9Y624 299 aaKnown RBP9.6□□□□□ -0.87
DDX56-209ENST00000473924 VWFP04275 2813 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 A0A1B0GU03 582 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 CEBPZOSA8MTT3 80 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 NXPH3O95157 252 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 DUS4LO95620 317 aaKnown RBP9.59□□□□□ -0.87
DDX56-209ENST00000473924 HOXB5P09067 269 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 FHL3Q13643 280 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 ZNF343Q6P1L6 599 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 OR2C3Q8N628 320 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 WFDC9Q8NEX5 89 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 EEF1AKMT3Q96AZ1 226 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 CXorf58Q96LI9 332 aa9.59□□□□□ -0.87
DDX56-209ENST00000473924 PKD1L1Q8TDX9 2849 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 IFNA21P01568 189 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 SUB1P53999 127 aaKnown RBP eCLIP9.58□□□□□ -0.88
DDX56-209ENST00000473924 SLURP1P55000 103 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 KLK9Q2XQG4 91 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 AARDQ4LEZ3 155 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 FAM209BQ5JX69 171 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 OR52B4Q8NGK2 314 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 OR1P1Q8NH06 330 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 MISP3Q96FF7 219 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
DDX56-209ENST00000473924 HEYLQ9NQ87 328 aaPredicted RBP9.58□□□□□ -0.88
DDX56-209ENST00000473924 KLK9Q9UKQ9 250 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 S4R3C0 116 aa9.58□□□□□ -0.88
DDX56-209ENST00000473924 TRRAPQ9Y4A5 3859 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 TRBV7-1A0A0A6YYK4 115 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 ADAP1O75689 374 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 IGLL1P15814 213 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 ZP3P21754 424 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 TNFRSF9Q07011 255 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 GGNBP1Q5YKI7 109 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 PLET1Q6UQ28 207 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 NRARPQ7Z6K4 114 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 ZNF114Q8NC26 417 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 MCRIP2Q9BUT9 160 aaKnown RBP9.57□□□□□ -0.88
DDX56-209ENST00000473924 HIPK2Q9H2X6 1198 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 DMRT1Q9Y5R6 373 aa9.57□□□□□ -0.88
DDX56-209ENST00000473924 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.56□□□□□ -0.88
DDX56-209ENST00000473924 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 MFSD2BA6NFX1 497 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 OVOL1O14753 267 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 SLC25A6P12236 298 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
DDX56-209ENST00000473924 MFAP2P55001 183 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 RPEL1Q2QD12 228 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 PDLIM3Q53GG5 364 aaPredicted RBP9.56□□□□□ -0.88
DDX56-209ENST00000473924 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 UXS1Q8NBZ7 420 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 DUSP18Q8NEJ0 188 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 VN1R17PQ8TDU5 208 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 ZNF431Q8TF32 576 aaPredicted RBP9.56□□□□□ -0.88
DDX56-209ENST00000473924 MITD1Q8WV92 249 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
DDX56-209ENST00000473924 DLX4Q92988 240 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms