RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SSBP2P81877 361 aaPredicted RBP14.42□□□□□ -0.1
VARS2-206ENST00000473916 TNXAQ16473 311 aa14.42□□□□□ -0.1
VARS2-206ENST00000473916 SLC25A22Q9H936 323 aa14.42□□□□□ -0.1
VARS2-206ENST00000473916 PPT1P50897 306 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 HAGHQ16775 308 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 C2orf83Q53S99 150 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 COMMD1Q8N668 190 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 GGACTQ9BVM4 153 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 GGTLC1Q9BX51 225 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 VWC2LB2RUY7 222 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 OR13C7P0DN81 318 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 CEACAM3P40198 252 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 ZNF709Q8N972 641 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 SSMEM1Q8WWF3 244 aa14.41□□□□□ -0.1
VARS2-206ENST00000473916 LSM4Q9Y4Z0 139 aaKnown RBP14.41□□□□□ -0.1
VARS2-206ENST00000473916 PTPN13Q12923 2485 aa14.4□□□□□ -0.1
VARS2-206ENST00000473916 SCAF4O95104 1147 aaKnown RBP14.4□□□□□ -0.1
VARS2-206ENST00000473916 AREGP15514 252 aa14.4□□□□□ -0.1
VARS2-206ENST00000473916 MIC13Q5XKP0 118 aa14.4□□□□□ -0.1
VARS2-206ENST00000473916 CLEC2AQ6UVW9 174 aa14.4□□□□□ -0.1
VARS2-206ENST00000473916 PPP1R27Q86WC6 154 aa14.4□□□□□ -0.1
VARS2-206ENST00000473916 IGLC7A0M8Q6 106 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 FOXH1O75593 365 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 IGHV3-48P01763 117 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 HABP2Q14520 560 aaPredicted RBP14.39□□□□□ -0.11
VARS2-206ENST00000473916 MMDQ15546 238 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 C10orf91Q5T1B1 145 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 ZNF787Q6DD87 383 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 FAM122CQ6P4D5 195 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 MMD2Q8IY49 270 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 LFNGQ8NES3 379 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 OR10G4Q8NGN3 311 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 OR10G9Q8NGN4 311 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 OR10G7Q8NGN6 311 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 AJUBAQ96IF1 538 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 P2RX4Q99571 388 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 ABCA12Q86UK0 2595 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 ABCA1O95477 2261 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 IGKV1OR2-108A0A075B7D4 117 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 A0A1W2PN81 502 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 MAP1LC3B2A6NCE7 125 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 RBFOX3A6NFN3 312 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 YIF1AO95070 293 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 SNRNP70P08621 437 aaKnown RBP14.39□□□□□ -0.11
VARS2-206ENST00000473916 M6PRP20645 277 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 CHRNA7P36544 502 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 COMPP49747 757 aaPredicted RBP14.39□□□□□ -0.11
VARS2-206ENST00000473916 LGALS4P56470 323 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 ERHP84090 104 aaKnown RBP14.39□□□□□ -0.11
VARS2-206ENST00000473916 MBD3L1Q8WWY6 194 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 MAP1LC3BQ9GZQ8 125 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 NPVFQ9HCQ7 196 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 KIAA1456Q9P272 454 aa14.39□□□□□ -0.11
VARS2-206ENST00000473916 C17orf112F2Z3M2 114 aa14.38□□□□□ -0.11
VARS2-206ENST00000473916 INS-IGF2F8WCM5 200 aa14.38□□□□□ -0.11
VARS2-206ENST00000473916 FBP1P09467 338 aa14.38□□□□□ -0.11
VARS2-206ENST00000473916 RPL27AP46776 148 aaKnown RBP14.38□□□□□ -0.11
VARS2-206ENST00000473916 KRTAP10-9P60411 292 aa14.38□□□□□ -0.11
VARS2-206ENST00000473916 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.38□□□□□ -0.11
VARS2-206ENST00000473916 EAF1Q96JC9 268 aaPredicted RBP14.38□□□□□ -0.11
VARS2-206ENST00000473916 GNG13Q9P2W3 67 aa14.38□□□□□ -0.11
VARS2-206ENST00000473916 CARHSP1Q9Y2V2 147 aaKnown RBP14.38□□□□□ -0.11
VARS2-206ENST00000473916 TRAV1-1A0A0B4J248 108 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 MFAP2P55001 183 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 GAMTQ14353 236 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 HES1Q14469 280 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 ICAM4Q14773 271 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 PEA15Q15121 130 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 PLGLAQ15195 96 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 SEC11CQ9BY50 192 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 TMPRSS5Q9H3S3 457 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 FNDC4Q9H6D8 234 aaPredicted RBP14.37□□□□□ -0.11
VARS2-206ENST00000473916 PXMP4Q9Y6I8 212 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 IGHV3OR16-10A0A075B7F0 116 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 ACTL6BO94805 426 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 RUSC1-AS1Q66K80 236 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 TEPPQ6URK8 271 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 OR2T6Q8NHC8 308 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 PBDC1Q9BVG4 233 aa14.37□□□□□ -0.11
VARS2-206ENST00000473916 BTBD17A6NE02 478 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 TEX22C9J3V5 150 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 MPDU1O75352 247 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 MOSP00540 346 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 HBE1P02100 147 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 OPRK1P41145 380 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 CD69Q07108 199 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 BTN1A1Q13410 526 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 RAB24Q969Q5 203 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 SLC39A9Q9NUM3 307 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 NBPF19A0A087WUL8 3843 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 ZFP92A6NM28 416 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 NBR2O15453 112 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 SAA4P35542 130 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 UBE2E1P51965 193 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 SLC16A13Q7RTY0 426 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 RXFP4Q8TDU9 374 aa14.36□□□□□ -0.11
VARS2-206ENST00000473916 MRPL36Q9P0J6 103 aaKnown RBP14.36□□□□□ -0.11
VARS2-206ENST00000473916 POLR3KQ9Y2Y1 108 aaPredicted RBP14.36□□□□□ -0.11
VARS2-206ENST00000473916 DOPEY2Q9Y3R5 2298 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms