RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 OR11H1Q8NG94 326 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 OR1L6Q8NGR2 347 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 OR52E5Q8NH55 327 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 FANCD2OSQ96PS1 177 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 MGAM2Q2M2H8 2515 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 IGLV11-55A0A075B6I3 123 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 INS-IGF2F8WCM5 200 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 OR2J3O76001 311 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 DUS4LO95620 317 aaKnown RBP16.08■□□□□ 0.16
TOP3A-204ENST00000472959 DEFA1P59665 94 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 DEFA3P59666 94 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 ERHP84090 104 aaKnown RBP16.08■□□□□ 0.16
TOP3A-204ENST00000472959 ZNF616Q08AN1 781 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 DHRS2Q13268 280 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 FHL3Q13643 280 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 FAM209BQ5JX69 171 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 ZNF343Q6P1L6 599 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 LINC00482Q8N8I6 264 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 DPF1Q92782 380 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 DUX3Q96PT4 197 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 NUDT15Q9NV35 164 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 THYN1Q9P016 225 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 FBXL7Q9UJT9 491 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 TMED3Q9Y3Q3 217 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 VWFP04275 2813 aa16.08■□□□□ 0.16
TOP3A-204ENST00000472959 A0A1B0GU03 582 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 HSPB1P04792 205 aaKnown RBP16.07■□□□□ 0.16
TOP3A-204ENST00000472959 OR8U8P0C7N1 319 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 CD33P20138 364 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 SPCS3P61009 180 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 C15orf32Q32M92 178 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 PDLIM3Q53GG5 364 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-204ENST00000472959 C19orf35Q6ZS72 473 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 OR2C3Q8N628 320 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 COQ8AQ8NI60 647 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 ENKURQ8TC29 256 aa16.07■□□□□ 0.16
TOP3A-204ENST00000472959 RANGRFQ9HD47 186 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-204ENST00000472959 F11RQ9Y624 299 aaKnown RBP16.07■□□□□ 0.16
TOP3A-204ENST00000472959 TRAV6A0A075B6T7 132 aa16.06■□□□□ 0.16
TOP3A-204ENST00000472959 H2AFB2P0C5Z0 115 aa16.06■□□□□ 0.16
TOP3A-204ENST00000472959 SMCO1Q147U7 214 aa16.06■□□□□ 0.16
TOP3A-204ENST00000472959 ZNF114Q8NC26 417 aa16.06■□□□□ 0.16
TOP3A-204ENST00000472959 OR1P1Q8NH06 330 aa16.06■□□□□ 0.16
TOP3A-204ENST00000472959 ENY2Q9NPA8 101 aa16.06■□□□□ 0.16
TOP3A-204ENST00000472959 LINC01619G3V211 115 aa16.05■□□□□ 0.16
TOP3A-204ENST00000472959 NDUFB8O95169 186 aa16.05■□□□□ 0.16
TOP3A-204ENST00000472959 SLC25A6P12236 298 aa16.05■□□□□ 0.16
TOP3A-204ENST00000472959 DEFA5Q01523 94 aa16.05■□□□□ 0.16
TOP3A-204ENST00000472959 EXOSC2Q13868 293 aaKnown RBP16.05■□□□□ 0.16
TOP3A-204ENST00000472959 PEF1Q9UBV8 284 aaKnown RBP16.05■□□□□ 0.16
TOP3A-204ENST00000472959 PKD1L1Q8TDX9 2849 aa16.04■□□□□ 0.16
TOP3A-204ENST00000472959 HOXA1P49639 335 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-204ENST00000472959 SPINK9Q5DT21 86 aa16.04■□□□□ 0.16
TOP3A-204ENST00000472959 SLC25A24Q6NUK1 477 aa16.04■□□□□ 0.16
TOP3A-204ENST00000472959 DUSP18Q8NEJ0 188 aa16.04■□□□□ 0.16
TOP3A-204ENST00000472959 CXorf58Q96LI9 332 aa16.04■□□□□ 0.16
TOP3A-204ENST00000472959 DMRT1Q9Y5R6 373 aa16.04■□□□□ 0.16
TOP3A-204ENST00000472959 IGHV4OR15-8A0A075B7B6 117 aa16.03■□□□□ 0.16
TOP3A-204ENST00000472959 A0A087WW49 117 aa16.03■□□□□ 0.16
TOP3A-204ENST00000472959 SNCAP37840 140 aa16.03■□□□□ 0.16
TOP3A-204ENST00000472959 MITD1Q8WV92 249 aa16.03■□□□□ 0.16
TOP3A-204ENST00000472959 EEF1AKMT3Q96AZ1 226 aa16.03■□□□□ 0.16
TOP3A-204ENST00000472959 RCC1LQ96I51 464 aaKnown RBP16.03■□□□□ 0.16
TOP3A-204ENST00000472959 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.02■□□□□ 0.16
TOP3A-204ENST00000472959 TRBV7-1A0A0A6YYK4 115 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 ANKRD34BA5PLL1 514 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 HOXB5P09067 269 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 ZP3P21754 424 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 SUB1P53999 127 aaKnown RBP eCLIP16.02■□□□□ 0.16
TOP3A-204ENST00000472959 MFAP2P55001 183 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 NRARPQ7Z6K4 114 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 OR1S1Q8NH92 325 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 VN1R17PQ8TDU5 208 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 MCRIP2Q9BUT9 160 aaKnown RBP16.02■□□□□ 0.16
TOP3A-204ENST00000472959 HSPB7Q9UBY9 170 aa16.02■□□□□ 0.16
TOP3A-204ENST00000472959 CEBPZOSA8MTT3 80 aa16.01■□□□□ 0.15
TOP3A-204ENST00000472959 PITX3O75364 302 aa16.01■□□□□ 0.15
TOP3A-204ENST00000472959 IFNA21P01568 189 aa16.01■□□□□ 0.15
TOP3A-204ENST00000472959 TNFRSF9Q07011 255 aa16.01■□□□□ 0.15
TOP3A-204ENST00000472959 GGNBP1Q5YKI7 109 aa16.01■□□□□ 0.15
TOP3A-204ENST00000472959 OR52B4Q8NGK2 314 aa16■□□□□ 0.15
TOP3A-204ENST00000472959 ZNF431Q8TF32 576 aaPredicted RBP16■□□□□ 0.15
TOP3A-204ENST00000472959 HIPK2Q9H2X6 1198 aa16■□□□□ 0.15
TOP3A-204ENST00000472959 HEYLQ9NQ87 328 aaPredicted RBP16■□□□□ 0.15
TOP3A-204ENST00000472959 MFSD2BA6NFX1 497 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 FAM90A26D6RGX4 464 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 IL5P05113 134 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 HOXD3P31249 432 aaPredicted RBP15.99■□□□□ 0.15
TOP3A-204ENST00000472959 HTR2BP41595 481 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 SLURP1P55000 103 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 PVRIGQ6DKI7 326 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 PLET1Q6UQ28 207 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 ATP6V0BQ99437 205 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 GPR61Q9BZJ8 451 aa15.99■□□□□ 0.15
TOP3A-204ENST00000472959 ADAP1O75689 374 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 TRBV12-3P01733 135 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 RNASE2P10153 161 aaKnown RBP15.98■□□□□ 0.15
TOP3A-204ENST00000472959 BSXQ3C1V8 233 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 ZNF502Q8TBZ5 544 aa15.98■□□□□ 0.15
TOP3A-204ENST00000472959 DCUN1D4Q92564 292 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms