RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR1L6Q8NGR2 347 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 OR5B3Q8NH48 314 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 SCARB1Q8WTV0 552 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
VTI1A-203ENST00000472892 HINT2Q9BX68 163 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 TMEM14BQ9NUH8 114 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 DNAH1Q9P2D7 4330 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 DBX1A6NMT0 343 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-203ENST00000472892 ELK1P19419 428 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 S100GP29377 79 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 UCP3P55916 312 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 VBP1P61758 197 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 PHLDA2Q53GA4 152 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 TMEM56Q96MV1 263 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 TSC22D3Q99576 134 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 C21orf62Q9NYP8 219 aa11.42□□□□□ -0.58
VTI1A-203ENST00000472892 K7EIM0 57 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 K7EMT4 169 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 NDUFA4O00483 81 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 RCVRNP35243 200 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 ADMP35318 185 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 TBC1D26Q86UD7 250 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 SNX29P2Q8IUI4 249 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 SLC38A6Q8IZM9 456 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 OR2C3Q8N628 320 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 SEC22AQ96IW7 307 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 SPAG8Q99932 426 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-203ENST00000472892 CHRDL1Q9BU40 450 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
VTI1A-203ENST00000472892 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
VTI1A-203ENST00000472892 LOC102724200A0A096LPH7 203 aaPredicted RBP11.4□□□□□ -0.58
VTI1A-203ENST00000472892 IGHV3-21A0A0B4J1V1 117 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 C15orf61A6NNL5 157 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 TSPAN4O14817 238 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 HPGDSO60760 199 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 IGKV1-39P01597 117 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 IGKV1D-39P04432 117 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 RORCP51449 518 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 OR1P1Q8NH06 330 aa11.4□□□□□ -0.58
VTI1A-203ENST00000472892 CTSGP08311 255 aa11.39□□□□□ -0.59
VTI1A-203ENST00000472892 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
VTI1A-203ENST00000472892 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
VTI1A-203ENST00000472892 C15orf62A8K5M9 175 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-203ENST00000472892 Q56UQ5 140 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 H2BFWTQ7Z2G1 175 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 UBAC2Q8NBM4 344 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 ZNF414Q96IQ9 312 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
VTI1A-203ENST00000472892 I3L2K1 104 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 M0QYG6 137 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 RND3P61587 244 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 HSPE1P61604 102 aaKnown RBP11.37□□□□□ -0.59
VTI1A-203ENST00000472892 PRCDQ00LT1 54 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 CTF1Q16619 201 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 TXN2Q99757 166 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 KLK11Q9UBX7 282 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
VTI1A-203ENST00000472892 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
VTI1A-203ENST00000472892 MFAP4P55083 255 aa11.36□□□□□ -0.59
VTI1A-203ENST00000472892 RELQ04864 619 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-203ENST00000472892 LHFPL1Q86WI0 220 aa11.36□□□□□ -0.59
VTI1A-203ENST00000472892 MRGPRFQ96AM1 343 aa11.36□□□□□ -0.59
VTI1A-203ENST00000472892 ZNF486Q96H40 463 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-203ENST00000472892 NAA50Q9GZZ1 169 aaKnown RBP11.36□□□□□ -0.59
VTI1A-203ENST00000472892 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
VTI1A-203ENST00000472892 EPPK1P58107 5090 aaKnown RBP11.36□□□□□ -0.59
VTI1A-203ENST00000472892 FAM25AB3EWG3 89 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 FAM25CB3EWG5 89 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 FAM25GB3EWG6 89 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 NUPL2O15504 423 aaKnown RBP11.35□□□□□ -0.59
VTI1A-203ENST00000472892 ZNF207O43670 478 aaKnown RBP11.35□□□□□ -0.59
VTI1A-203ENST00000472892 GABARAPO95166 117 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-203ENST00000472892 ERHP84090 104 aaKnown RBP11.35□□□□□ -0.59
VTI1A-203ENST00000472892 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 Q6ZWC4 215 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 WFDC3Q8IUB2 231 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 ARRDC1Q8N5I2 433 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 AP3S1Q92572 193 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 MISP3Q96FF7 219 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 OR10C1Q96KK4 312 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 MTFP1Q9UDX5 166 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 UBQLN2Q9UHD9 624 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 TP53TG1Q9Y2A0 90 aa11.35□□□□□ -0.59
VTI1A-203ENST00000472892 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
VTI1A-203ENST00000472892 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 UBE2CO00762 179 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 CHEK1O14757 476 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 MT-CO2P00403 227 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 CD3DP04234 171 aa11.34□□□□□ -0.59
VTI1A-203ENST00000472892 CTSDP07339 412 aaPredicted RBP11.34□□□□□ -0.59
VTI1A-203ENST00000472892 P0C879 139 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms