RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 FGF7P21781 194 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 RAB31Q13636 194 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 Q8N6K4 173 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
HIF3A-206ENST00000472815 SRSF12Q8WXF0 261 aaKnown RBP11.69□□□□□ -0.54
HIF3A-206ENST00000472815 Q96MF0 132 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 SETXQ7Z333 2677 aaKnown RBP11.68□□□□□ -0.54
HIF3A-206ENST00000472815 CORTO00230 105 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 TGFAP01135 160 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 RNASE2P10153 161 aaKnown RBP11.68□□□□□ -0.54
HIF3A-206ENST00000472815 RUNX1Q01196 453 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 C17orf50Q8WW18 174 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 CACNG8Q8WXS5 425 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 CXorf58Q96LI9 332 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 CITED4Q96RK1 184 aa11.68□□□□□ -0.54
HIF3A-206ENST00000472815 PRSS46E5RG02 174 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 TEX46H3BTG2 121 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 MBP02144 154 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 FBP1P09467 338 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 CD24P25063 80 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 MRGPRG-AS1Q2M3A8 158 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 TUSC1Q2TAM9 212 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 TMEM249Q2WGJ8 235 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 C10orf55Q5SWW7 151 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 ETFRF1Q6IPR1 90 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 Q6ZRG5 221 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 MEGF9Q9H1U4 602 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 VPS13CQ709C8 3753 aa11.67□□□□□ -0.54
HIF3A-206ENST00000472815 GPX4P36969 197 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-206ENST00000472815 RAB2AP61019 212 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 AKR1C1Q04828 323 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 WT1-ASQ06250 92 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 ZNF616Q08AN1 781 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 PXDC1Q5TGL8 231 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 TEPPQ6URK8 271 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 BTNL8Q6UX41 500 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 ZNF562Q6V9R5 426 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 CENPVQ7Z7K6 275 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-206ENST00000472815 OR1L6Q8NGR2 347 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 ABHD5Q8WTS1 349 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 AJUBAQ96IF1 538 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 RASL11BQ9BPW5 248 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 RSG1Q9BU20 258 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 WDR83OSQ9Y284 106 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 PRRC2AP48634 2157 aaKnown RBP11.66□□□□□ -0.54
HIF3A-206ENST00000472815 MAP1AP78559 2803 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-206ENST00000472815 CSMD1Q96PZ7 3565 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 IGLC7A0M8Q6 106 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 CGB1A6NKQ9 187 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 E7EUB6 86 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 CYB5BO43169 146 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 PAX6P26367 422 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 RUSC1-AS1Q66K80 236 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 IL34Q6ZMJ4 242 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 NPCDR1Q9BY65 106 aa11.66□□□□□ -0.54
HIF3A-206ENST00000472815 IGHV3OR16-10A0A075B7F0 116 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 IGHV4-31P0DP07 118 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 IGHV4-38-2P0DP08 117 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 FXYD3Q14802 87 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 CYB5R2Q6BCY4 276 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 COMMD1Q8N668 190 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 TEX29Q8N6K0 151 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 OR1P1Q8NH06 330 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 FAM213BQ8TBF2 198 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 C22orf15Q8WYQ4 148 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 MARC2Q969Z3 335 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 FOXC2Q99958 501 aa11.65□□□□□ -0.54
HIF3A-206ENST00000472815 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 FCN1O00602 326 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 TSPAN15O95858 294 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 MDKP21741 143 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-206ENST00000472815 OPRK1P41145 380 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 CD69Q07108 199 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 AANATQ16613 207 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 TMEM41BQ5BJD5 291 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 EIF4E3Q8N5X7 224 aaKnown RBP11.64□□□□□ -0.55
HIF3A-206ENST00000472815 LFNGQ8NES3 379 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 SSMEM1Q8WWF3 244 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 P2RX4Q99571 388 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 HRH4Q9H3N8 390 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 PITPNC1Q9UKF7 332 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 CR1P17927 2039 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 CCDC168Q8NDH2 2452 aa11.64□□□□□ -0.55
HIF3A-206ENST00000472815 A0A0U1RQK1 487 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 TEX22C9J3V5 150 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 HLA-DRB1P01911 266 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 HBE1P02100 147 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 ARPC1AQ92747 370 aa11.63□□□□□ -0.55
HIF3A-206ENST00000472815 F11RQ9Y624 299 aaKnown RBP11.63□□□□□ -0.55
HIF3A-206ENST00000472815 NOTCH2Q04721 2471 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms