RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 IL18Q14116 193 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 SPCS2Q15005 226 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 STEAP1BQ6NZ63 245 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 RBPMS2Q6ZRY4 209 aaKnown RBP11.28□□□□□ -0.6
HOXB3-206ENST00000471459 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 BSCL2Q96G97 398 aaPredicted RBP11.28□□□□□ -0.6
HOXB3-206ENST00000471459 SPATA25Q9BR10 227 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 PDCD10Q9BUL8 212 aa11.28□□□□□ -0.6
HOXB3-206ENST00000471459 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
HOXB3-206ENST00000471459 OR2T8A6NH00 312 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 DISC1C4P0D8 188 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 PI3P19957 117 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 SNCAP37840 140 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 RPL5P46777 297 aaKnown RBP11.27□□□□□ -0.61
HOXB3-206ENST00000471459 AKR1C2P52895 323 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 Q56UQ5 140 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 ADAMTSL5Q6ZMM2 481 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 LHFPL1Q86WI0 220 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 RNASE11Q8TAA1 199 aaKnown RBP11.27□□□□□ -0.61
HOXB3-206ENST00000471459 RRNAD1Q96FB5 475 aaKnown RBP11.27□□□□□ -0.61
HOXB3-206ENST00000471459 TM2D3Q9BRN9 247 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 THAP7Q9BT49 309 aaPredicted RBP11.27□□□□□ -0.61
HOXB3-206ENST00000471459 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.61
HOXB3-206ENST00000471459 C14orf166Q9Y224 244 aaKnown RBP11.27□□□□□ -0.61
HOXB3-206ENST00000471459 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 IGHV3-35A0A0C4DH35 117 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 NUPL2O15504 423 aaKnown RBP11.26□□□□□ -0.61
HOXB3-206ENST00000471459 IFNA17P01571 189 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 CD74P04233 296 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 PPP5CP53041 499 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 HAGHQ16775 308 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 TM4SF20Q53R12 229 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 LAMTOR1Q6IAA8 161 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 OR52B4Q8NGK2 314 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 SCARB1Q8WTV0 552 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 C6orf62Q9GZU0 229 aaPredicted RBP11.26□□□□□ -0.61
HOXB3-206ENST00000471459 MIXL1Q9H2W2 232 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
HOXB3-206ENST00000471459 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
HOXB3-206ENST00000471459 IGHV3-21A0A0B4J1V1 117 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 TEX13DA0A0J9YY54 714 aaPredicted RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 NDUFA4O00483 81 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 MFAP4P55083 255 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 RELQ04864 619 aaPredicted RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 OR2C3Q8N628 320 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 SLC35G3Q8N808 338 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 MUC7Q8TAX7 377 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 WDR89Q96FK6 387 aaPredicted RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 TXN2Q99757 166 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
HOXB3-206ENST00000471459 ZNF436Q9C0F3 470 aaPredicted RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 DAZ1Q9NQZ3 744 aaKnown RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 RSL24D1Q9UHA3 163 aaKnown RBP11.25□□□□□ -0.61
HOXB3-206ENST00000471459 CTDSPLO15194 276 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 IGKV1-39P01597 117 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 IGKV1D-39P04432 117 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 CD7P09564 240 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 AKAIN1P0CW23 69 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
HOXB3-206ENST00000471459 BTNL8Q6UX41 500 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 UNQ9165/PRO28630Q6UXU0 137 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 TMEM61Q8N0U2 210 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 OR13C8Q8NGS7 320 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 MARCH1Q8TCQ1 289 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 DYNC2LI1Q8TCX1 351 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 SMIM4Q8WVI0 70 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 SCGB3A2Q96PL1 93 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 CITED4Q96RK1 184 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 TP53RKQ96S44 253 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 PRRT1Q99946 306 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 MLXQ9UH92 298 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 CEPT1Q9Y6K0 416 aa11.24□□□□□ -0.61
HOXB3-206ENST00000471459 DBX1A6NMT0 343 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 K7EMT4 169 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 YIF1AO95070 293 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 SCAF4O95104 1147 aaKnown RBP11.23□□□□□ -0.61
HOXB3-206ENST00000471459 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 LYL1P12980 280 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 MFAP2P55001 183 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 SP6Q3SY56 376 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 DEFB125Q8N687 156 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 PINX1Q96BK5 328 aaKnown RBP11.23□□□□□ -0.61
HOXB3-206ENST00000471459 ISOC1Q96CN7 298 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 SCP2D1Q9UJQ7 156 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 KCNIP3Q9Y2W7 256 aa11.23□□□□□ -0.61
HOXB3-206ENST00000471459 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms