RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 HCP5Q6MZN7 132 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 MRPL41Q8IXM3 137 aaKnown RBP14.03□□□□□ -0.16
HSPG2-208ENST00000471322 NDUFA4L2Q9NRX3 87 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 TMEM160Q9NX00 188 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 IGHV3-72A0A0B4J1Y9 119 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 A0A1W2PPI3 338 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 RRHO14718 337 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 SOX15O60248 233 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 MPDU1O75352 247 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 HNF1AP20823 631 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 MAS1LP35410 378 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 ERHP84090 104 aaKnown RBP14.02□□□□□ -0.16
HSPG2-208ENST00000471322 MMD2Q8IY49 270 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 ZNF709Q8N972 641 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 LFNGQ8NES3 379 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 FBXO7Q9Y3I1 522 aa14.02□□□□□ -0.16
HSPG2-208ENST00000471322 BTBD17A6NE02 478 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 SLC25A17O43808 307 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 TOX4O94842 621 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 SRD5A1P18405 259 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 SNCAP37840 140 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 LGALS4P56470 323 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 RAB2AP61019 212 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 ATRQ13535 2644 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 FNDC10F2Z333 226 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 CA2P00918 260 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 MBP02144 154 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 FGF7P21781 194 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 HABP2Q14520 560 aaPredicted RBP14.01□□□□□ -0.17
HSPG2-208ENST00000471322 PSG5Q15238 335 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 RSG1Q9BU20 258 aa14.01□□□□□ -0.17
HSPG2-208ENST00000471322 ZNF430Q9H8G1 570 aaPredicted RBP14.01□□□□□ -0.17
HSPG2-208ENST00000471322 TBL2Q9Y4P3 447 aaKnown RBP14.01□□□□□ -0.17
HSPG2-208ENST00000471322 PRSS46E5RG02 174 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 TIMM23O14925 209 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 ACTL6BO94805 426 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 CRYGBP07316 175 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 MYOD1P15172 320 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 MDKP21741 143 aaPredicted RBP14□□□□□ -0.17
HSPG2-208ENST00000471322 GATA3P23771 443 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 FHITP49789 147 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 UBE2E1P51965 193 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 KLRD1Q13241 179 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 C2orf83Q53S99 150 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 RITA1Q96K30 269 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 WDR83OSQ9Y284 106 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 RFNGQ9Y644 331 aa14□□□□□ -0.17
HSPG2-208ENST00000471322 IGHV3OR16-10A0A075B7F0 116 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 HBE1P02100 147 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 OPN1MWP04001 364 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 OPN1MW2P0DN77 364 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 OPN1MW3P0DN78 364 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 SUB1P53999 127 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■■□□□ 14.2
HSPG2-208ENST00000471322 RIPPLY3P57055 190 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 PRSS8Q16651 343 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 BSXQ3C1V8 233 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 PRIMA1Q86XR5 153 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 BPIFCQ8NFQ6 507 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 RBMXL1Q96E39 390 aaKnown RBP13.99□□□□□ -0.17
HSPG2-208ENST00000471322 SIGLEC9Q9Y336 463 aa13.99□□□□□ -0.17
HSPG2-208ENST00000471322 FBN1P35555 2871 aaKnown RBP13.99□□□□□ -0.17
HSPG2-208ENST00000471322 J3QLI3 93 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 VENTXO95231 258 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 PAX8Q06710 450 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 TMEM41BQ5BJD5 291 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 LDLRAD2Q5SZI1 272 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 NPCDR1Q9BY65 106 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 NPVFQ9HCQ7 196 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 HILPDAQ9Y5L2 63 aa13.98□□□□□ -0.17
HSPG2-208ENST00000471322 TRAV1-1A0A0B4J248 108 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 MOSP00540 346 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 PPP1R27Q86WC6 154 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 CFHR4Q92496 578 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 MALSU1Q96EH3 234 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 NARS2Q96I59 477 aaKnown RBP13.97□□□□□ -0.17
HSPG2-208ENST00000471322 LINC00052Q96N35 136 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 PBDC1Q9BVG4 233 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 KCNIP2Q9NS61 270 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
HSPG2-208ENST00000471322 TMEM218A2RU14 115 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 SMCO3A2RU48 225 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 RAB31Q13636 194 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 CCDC28AQ8IWP9 274 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 TBX15Q96SF7 602 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 TREM1Q9NP99 234 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 RPRMQ9NS64 109 aa13.97□□□□□ -0.17
HSPG2-208ENST00000471322 A0A1B0GW64 132 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 AGPAT2O15120 278 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 RNASE2P10153 161 aaKnown RBP13.96□□□□□ -0.17
HSPG2-208ENST00000471322 RPL27AP46776 148 aaKnown RBP13.96□□□□□ -0.17
HSPG2-208ENST00000471322 SRSF2Q01130 221 aaKnown RBP13.96□□□□□ -0.17
HSPG2-208ENST00000471322 PEA15Q15121 130 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 TUSC1Q2TAM9 212 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 TREML4Q6UXN2 200 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms