RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 IGKV1-5P01602 117 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 FOLR2P14207 255 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 EDN2P20800 178 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 MFAP2P55001 183 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 HSPE1P61604 102 aaKnown RBP11.91□□□□□ -0.5
HDAC6-218ENST00000470942 PLET1Q6UQ28 207 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 ADAMTSL5Q6ZMM2 481 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 SGPP2Q8IWX5 399 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 OR2K2Q8NGT1 345 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 PRRT1Q99946 306 aa11.91□□□□□ -0.5
HDAC6-218ENST00000470942 IGHV3-35A0A0C4DH35 117 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 TEX13DA0A0J9YY54 714 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-218ENST00000470942 ANKRD20A5PA0PJZ0 165 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 FRMD6-AS1P0C7T7 363 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 PRCDQ00LT1 54 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-218ENST00000470942 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-218ENST00000470942 GTSCR1Q86UQ5 136 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 Q8N1Y9 231 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 OR51S1Q8NGJ8 323 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 RNASE11Q8TAA1 199 aaKnown RBP11.9□□□□□ -0.5
HDAC6-218ENST00000470942 RRNAD1Q96FB5 475 aaKnown RBP11.9□□□□□ -0.5
HDAC6-218ENST00000470942 SOSTQ9BQB4 213 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 RTBDNQ9BSG5 229 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-218ENST00000470942 U3KQK5 164 aa11.9□□□□□ -0.5
HDAC6-218ENST00000470942 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 TGOLN2O43493 480 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 B3GALNT1O75752 331 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 UCP1P25874 307 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 S100A5P33763 92 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 ERHP84090 104 aaKnown RBP11.89□□□□□ -0.51
HDAC6-218ENST00000470942 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 PYDC2Q56P42 97 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 SPINK9Q5DT21 86 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 OR2C3Q8N628 320 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 OR1P1Q8NH06 330 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 SCARB1Q8WTV0 552 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 CACNG8Q8WXS5 425 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 THAP7Q9BT49 309 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-218ENST00000470942 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 C5orf66Q9H5L9 145 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 NAA60Q9H7X0 242 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 PLEKHA3Q9HB20 300 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 PALMDQ9NP74 551 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 MCUBQ9NWR8 336 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 C21orf62Q9NYP8 219 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 SCP2D1Q9UJQ7 156 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 GPR132Q9UNW8 380 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 SELENOKQ9Y6D0 94 aa11.89□□□□□ -0.51
HDAC6-218ENST00000470942 IFNA17P01571 189 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 OR5AC1P0C628 307 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 IGHV4-30-4P0DP06 118 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 CBLN1P23435 193 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 Q56UQ5 140 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 SLC35G3Q8N808 338 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 TMEM222Q9H0R3 208 aa11.88□□□□□ -0.51
HDAC6-218ENST00000470942 TECRQ9NZ01 308 aaKnown RBP11.88□□□□□ -0.51
HDAC6-218ENST00000470942 A0A0B4J293 547 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 TMEM213A2RRL7 107 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 K7EIM0 57 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 ST8SIA3O43173 380 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 P0C879 139 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 DHODHQ02127 395 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 GUCA2BQ16661 112 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 TM4SF20Q53R12 229 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 UXS1Q8NBZ7 420 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 BSCL2Q96G97 398 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-218ENST00000470942 SCGB3A2Q96PL1 93 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 RBM38Q9H0Z9 239 aaKnown RBP11.87□□□□□ -0.51
HDAC6-218ENST00000470942 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
HDAC6-218ENST00000470942 CRYM-AS1A6NIL9 109 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 A8MWP6 167 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 CDS2O95674 445 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 SNCAP37840 140 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 ETV6P41212 452 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 ZNF57Q68EA5 555 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-218ENST00000470942 SPSB3Q6PJ21 355 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 GLYATL2Q8WU03 294 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 PINX1Q96BK5 328 aaKnown RBP11.86□□□□□ -0.51
HDAC6-218ENST00000470942 WWC2-AS2Q96NR7 200 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-218ENST00000470942 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 SLC2A8Q9NY64 477 aa11.86□□□□□ -0.51
HDAC6-218ENST00000470942 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 MT-CO2P00403 227 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 FAUP35544 74 aaKnown RBP11.85□□□□□ -0.51
HDAC6-218ENST00000470942 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-218ENST00000470942 MFAP4P55083 255 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 CD81P60033 236 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 FAM219AQ8IW50 185 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 SELENOHQ8IZQ5 122 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms