RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TMEM203Q969S6 136 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 NDUFAF3Q9BU61 184 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 ACOT13Q9NPJ3 140 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 TAS2R8Q9NYW2 309 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 IGHV7-4-1A0A0J9YVY3 117 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 TMEM272A0A1B0GTI8 110 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 A0A1B0GW64 132 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 IGLC7A0M8Q6 106 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 PTGES3LE9PB15 166 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 RAB27BO00194 218 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 YIF1AO95070 293 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 IFNA21P01568 189 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 IFNA17P01571 189 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 HLA-DMBP28068 263 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 TFPI2P48307 235 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 LGALS9BQ3B8N2 356 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 TIMM50Q3ZCQ8 353 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 Q56UQ5 140 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 MORN3Q6PF18 240 aaPredicted RBP6.44□□□□□ -1.38
XRN1-208ENST00000470537 C19orf35Q6ZS72 473 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 SPAG16Q8N0X2 631 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 UBAC2Q8NBM4 344 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 DUSP18Q8NEJ0 188 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 DMBX1Q8NFW5 382 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 OR1L8Q8NGR8 309 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 TMEM56Q96MV1 263 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 RNF2Q99496 336 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 GINS3Q9BRX5 216 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 FKBP11Q9NYL4 201 aa6.44□□□□□ -1.38
XRN1-208ENST00000470537 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 UPK2O00526 184 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 CHEK1O14757 476 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 DEFB4AO15263 64 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 S1PR2O95136 353 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 IFNA10P01566 189 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 HSMCR30P0CW71 290 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 SPP1P10451 314 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 ERVK-16P61578 105 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
XRN1-208ENST00000470537 POU2AF1Q16633 256 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 CDNFQ49AH0 187 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 HACD4Q5VWC8 232 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 SCARB1Q8WTV0 552 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 DGCR14Q96DF8 476 aaKnown RBP6.43□□□□□ -1.38
XRN1-208ENST00000470537 OR10C1Q96KK4 312 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 TXN2Q99757 166 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 ATG5Q9H1Y0 275 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 TMEM231Q9H6L2 316 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 PLEKHA2Q9HB19 425 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 FKBP14Q9NWM8 211 aa6.43□□□□□ -1.38
XRN1-208ENST00000470537 IGKV3-7A0A075B6H7 116 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 DEFB131BA0A096LNP1 70 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 IFITM5A6NNB3 132 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 CASQ2O14958 399 aaPredicted RBP6.42□□□□□ -1.38
XRN1-208ENST00000470537 ZNF207O43670 478 aaKnown RBP6.42□□□□□ -1.38
XRN1-208ENST00000470537 SNAPC5O75971 98 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 IGLV2-14P01704 120 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 AMBPP02760 352 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 MFAP4P55083 255 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 HES5Q5TA89 166 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 TMEM91Q6ZNR0 172 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 GBGT1Q8N5D6 347 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 Q8NAQ8 132 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 GIMAP1Q8WWP7 306 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 LSM10Q969L4 123 aaKnown RBP6.42□□□□□ -1.38
XRN1-208ENST00000470537 GFI1Q99684 422 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 VCXQ9H320 206 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 ANXA10Q9UJ72 324 aa6.42□□□□□ -1.38
XRN1-208ENST00000470537 F11RQ9Y624 299 aaKnown RBP6.42□□□□□ -1.38
XRN1-208ENST00000470537 IGKV1D-8A0A087WSZ0 117 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 TRAV1-2A0A0B4J238 106 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 IGHV4-28A0A0C4DH34 117 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 A0A1W2PS18 150 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 CGB1A6NKQ9 187 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 ST8SIA3O43173 380 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 CTSGP08311 255 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 MYL9P24844 172 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 BRWD1-AS2P59051 145 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 GNG2P59768 71 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 DEFB131AP59861 70 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 NUTF2P61970 127 aaKnown RBP6.41□□□□□ -1.38
XRN1-208ENST00000470537 MLLT11Q13015 90 aaPredicted RBP6.41□□□□□ -1.38
XRN1-208ENST00000470537 EIF4EBP1Q13541 118 aaPredicted RBP6.41□□□□□ -1.38
XRN1-208ENST00000470537 FAM90A2PQ658T7 463 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 ZNF773Q6PK81 442 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 Q6ZTC4 211 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 TCF24Q7RTU0 167 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 TPRA1Q86W33 373 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 UBE2DNLQ8IWF7 75 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 CADM3Q8N126 398 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 TSPAN14Q8NG11 270 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 OR10W1Q8NGF6 305 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 SECTM1Q8WVN6 248 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 FAM210BQ96KR6 192 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 CHRDL1Q9BU40 450 aa6.41□□□□□ -1.38
XRN1-208ENST00000470537 C1QTNF4Q9BXJ3 329 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms