RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 TRBV6-7A0A0A0MS04 114 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 IGKV1D-13A0A0B4J2D9 117 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 K7EMT4 169 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 NDUFA4O00483 81 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 NUPL2O15504 423 aaKnown RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 FABP7O15540 132 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 WBP4O75554 376 aaKnown RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 DCTN3O75935 186 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 DFFBO76075 338 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 IGHV3-48P01763 117 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 ALPLP05186 524 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CTSGP08311 255 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 IGKV1-13P0DP09 117 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 RRASP10301 218 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CD37P11049 281 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 DEFA4P12838 97 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 HIST1H1BP16401 226 aaKnown RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 MAP2K4P45985 399 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 EMP1P54849 157 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 WT1-ASQ06250 92 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 MRPL28Q13084 256 aaKnown RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CBX3Q13185 183 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 EIF4EBP1Q13541 118 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 IRF3Q14653 427 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 P2RY14Q15391 338 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 RNF212Q495C1 297 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 C1orf100Q5SVJ3 147 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 GLT8D1Q68CQ7 371 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 GSG1LQ6UXU4 331 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 TCF24Q7RTU0 167 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CDH26Q8IXH8 852 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 H1FOOQ8IZA3 346 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 FAM89BQ8N5H3 189 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 UBAC2Q8NBM4 344 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 ZNRF2Q8NHG8 242 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 SCARB1Q8WTV0 552 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 SLC29A1Q99808 456 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CMSS1Q9BQ75 279 aaKnown RBP3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CABLES2Q9BTV7 478 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 MS4A6AQ9H2W1 248 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 CKLFQ9UBR5 152 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 TBC1D24Q9ULP9 559 aa3.7□□□□□ -1.82
PTPN4-209ENST00000469511 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
PTPN4-209ENST00000469511 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 J3KRW8 73 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 K7EIM0 57 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 EI24O14681 340 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 SLPIP03973 132 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 FCGR3AP08637 254 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 CLDN12P56749 244 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 DEFB1P60022 68 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 KRTAP10-1P60331 282 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 ARFRP1Q13795 201 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 YIF1BQ5BJH7 314 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 ACTL10Q5JWF8 245 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 UBE2UQ5VVX9 321 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 SLC25A24Q6NUK1 477 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 MORN3Q6PF18 240 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-209ENST00000469511 ZNF773Q6PK81 442 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 KCTD9Q7L273 389 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 STHQ8IWL8 128 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 OR4A4PQ8NGN8 299 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 OR10J5Q8NHC4 309 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 MRPL48Q96GC5 212 aaKnown RBP3.69□□□□□ -1.82
PTPN4-209ENST00000469511 SRSF8Q9BRL6 282 aaKnown RBP3.69□□□□□ -1.82
PTPN4-209ENST00000469511 UQCC2Q9BRT2 126 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 RIMS4Q9H426 269 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-209ENST00000469511 C12orf4Q9NQ89 552 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 C21orf62Q9NYP8 219 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 RBM7Q9Y580 266 aaKnown RBP3.69□□□□□ -1.82
PTPN4-209ENST00000469511 AP4S1Q9Y587 144 aa3.69□□□□□ -1.82
PTPN4-209ENST00000469511 C15orf62A8K5M9 175 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 K7EQG2 157 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 YIF1AO95070 293 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 PRM2P04554 102 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 ZNF688P0C7X2 276 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 OR13C7P0DN81 318 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 HLA-GP17693 338 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 CELP19835 753 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 NFYAP23511 347 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-209ENST00000469511 CMC4P56277 68 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-209ENST00000469511 FXYD7P58549 80 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 RPL8P62917 257 aaKnown RBP3.68□□□□□ -1.82
PTPN4-209ENST00000469511 GNGT1P63211 74 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 TPBGQ13641 420 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 TIMM50Q3ZCQ8 353 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 Q56UQ5 140 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 FAM222AQ5U5X8 452 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 VN1R17PQ8TDU5 208 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 BSCL2Q96G97 398 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-209ENST00000469511 CENPNQ96H22 339 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-209ENST00000469511 ADTRPQ96IZ2 230 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 OR10C1Q96KK4 312 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 VSIRQ9H7M9 311 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 TMEM14BQ9NUH8 114 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 GHRLQ9UBU3 117 aa3.68□□□□□ -1.82
PTPN4-209ENST00000469511 RABAC1Q9UI14 185 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms