RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 MYOD1P15172 320 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 SLC25A16P16260 332 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 GPX4P36969 197 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-205ENST00000469129 DLX1P56177 255 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 MMDQ15546 238 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 TUSC1Q2TAM9 212 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 C10orf91Q5T1B1 145 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 ETFRF1Q6IPR1 90 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 ACSM6Q6P461 480 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 SPSB3Q6PJ21 355 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 OR10G4Q8NGN3 311 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 OR10G9Q8NGN4 311 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 OR10G7Q8NGN6 311 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 CACNG8Q8WXS5 425 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 C22orf15Q8WYQ4 148 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 TMEM231Q9H6L2 316 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 SLC39A9Q9NUM3 307 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 FAM96BQ9Y3D0 163 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 RBFOX3A6NFN3 312 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 NDUFA3O95167 84 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 IGKV1D-33P01593 117 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 IGKV1-33P01594 117 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 SNRNP70P08621 437 aaKnown RBP7.5□□□□□ -1.21
SMC1A-205ENST00000469129 BRS3P32247 399 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 CDC34P49427 236 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-205ENST00000469129 PPT1P50897 306 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 DEFA5Q01523 94 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 PRB3Q04118 309 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-205ENST00000469129 CD69Q07108 199 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 KHDC3LQ587J8 217 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-205ENST00000469129 ZNF506Q5JVG8 444 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 SP5Q6BEB4 398 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-205ENST00000469129 SLC16A13Q7RTY0 426 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 TMEM144Q7Z5S9 345 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 NPBQ8NG41 125 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 MALSU1Q96EH3 234 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 TBX15Q96SF7 602 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 GGTLC1Q9BX51 225 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 MANBALQ9NQG1 85 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 TPSG1Q9NRR2 321 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 LSM4Q9Y4Z0 139 aaKnown RBP7.5□□□□□ -1.21
SMC1A-205ENST00000469129 HILPDAQ9Y5L2 63 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 RFNGQ9Y644 331 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 PXMP4Q9Y6I8 212 aa7.5□□□□□ -1.21
SMC1A-205ENST00000469129 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 A0A1B0GV50 99 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 A0A1W2PPV4 95 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 IGLC7A0M8Q6 106 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 SEC14L6B5MCN3 397 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
SMC1A-205ENST00000469129 MT-CO2P00403 227 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 HSPB1P04792 205 aaKnown RBP7.49□□□□□ -1.21
SMC1A-205ENST00000469129 OR13C7P0DN81 318 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 RPL29P47914 159 aaKnown RBP7.49□□□□□ -1.21
SMC1A-205ENST00000469129 GNB1P62873 340 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 SRSF3P84103 164 aaKnown RBP7.49□□□□□ -1.21
SMC1A-205ENST00000469129 PMS2P11Q13670 270 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 EBI3Q14213 229 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 HES1Q14469 280 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 C10orf55Q5SWW7 151 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 FAM122CQ6P4D5 195 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 RBMS3Q6XE24 437 aaKnown RBP7.49□□□□□ -1.21
SMC1A-205ENST00000469129 LHFPL4Q7Z7J7 247 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 OR10W1Q8NGF6 305 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 OR1L6Q8NGR2 347 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 SRSF12Q8WXF0 261 aaKnown RBP7.49□□□□□ -1.21
SMC1A-205ENST00000469129 PERPQ96FX8 193 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 P2RX4Q99571 388 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 MGST2Q99735 147 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 SLC35B3Q9H1N7 401 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 FBXL15Q9H469 300 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 VSIRQ9H7M9 311 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 ABCA2Q9BZC7 2435 aa7.49□□□□□ -1.21
SMC1A-205ENST00000469129 NAV3Q8IVL0 2385 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 IGHV4-61A0A0C4DH41 118 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 CGB1A6NKQ9 187 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 FAM157AC9JC47 383 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 NPFFO15130 113 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 BCL2P10415 239 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 TMEM11P17152 192 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 ADCYAP1P18509 176 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 GATA3P23771 443 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 CNTFRP26992 372 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 PSMB3P49720 205 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 B2MP61769 119 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 RHOBP62745 196 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 WT1-ASQ06250 92 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 HNF4GQ14541 408 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 ZNF726P1Q15940 193 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 SSX2Q16385 188 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 MRGPRG-AS1Q2M3A8 158 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 LDLRAD2Q5SZI1 272 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 LCN15Q6UWW0 184 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 RPP25LQ8N5L8 163 aaKnown RBP7.48□□□□□ -1.21
SMC1A-205ENST00000469129 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 OR1P1Q8NH06 330 aa7.48□□□□□ -1.21
SMC1A-205ENST00000469129 ABHD5Q8WTS1 349 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms