RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 SPINK9Q5DT21 86 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 ZNF57Q68EA5 555 aaPredicted RBP13.25□□□□□ -0.29
CLDN11-202ENST00000468358 SGPP2Q8IWX5 399 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 TRIM63Q969Q1 353 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 CCDC140Q96MF4 163 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 TMEM222Q9H0R3 208 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 PLEKHA3Q9HB20 300 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 ZC4H2Q9NQZ6 224 aa13.25□□□□□ -0.29
CLDN11-202ENST00000468358 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
CLDN11-202ENST00000468358 TRBV7-1A0A0A6YYK4 115 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 IGHV3-21A0A0B4J1V1 117 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 OR2C1O95371 312 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 IFNA17P01571 189 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 AKR1C4P17516 323 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 GPR183P32249 361 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 HSPE1P61604 102 aaKnown RBP13.24□□□□□ -0.29
CLDN11-202ENST00000468358 PRCDQ00LT1 54 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 DHODHQ02127 395 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 KLF9Q13886 244 aaPredicted RBP13.24□□□□□ -0.29
CLDN11-202ENST00000468358 SLC35G3Q8N808 338 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
CLDN11-202ENST00000468358 KLK9Q2XQG4 91 aa13.23□□□□□ -0.29
CLDN11-202ENST00000468358 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
CLDN11-202ENST00000468358 TRIQKQ629K1 86 aa13.23□□□□□ -0.29
CLDN11-202ENST00000468358 OR1L6Q8NGR2 347 aa13.23□□□□□ -0.29
CLDN11-202ENST00000468358 GLYATL2Q8WU03 294 aa13.23□□□□□ -0.29
CLDN11-202ENST00000468358 RBPMSQ93062 196 aaKnown RBP13.23□□□□□ -0.29
CLDN11-202ENST00000468358 KLK9Q9UKQ9 250 aa13.23□□□□□ -0.29
CLDN11-202ENST00000468358 ST8SIA3O43173 380 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 CDS2O95674 445 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 CLEC3BP05452 202 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 ETV6P41212 452 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
CLDN11-202ENST00000468358 CD69Q07108 199 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 UBAC2Q8NBM4 344 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 MISP3Q96FF7 219 aa13.22□□□□□ -0.29
CLDN11-202ENST00000468358 A0A0B4J293 547 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 A0A0G2JRQ6 117 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 ZNF320A2RRD8 509 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 CSN3P07498 182 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 GP9P14770 177 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-202ENST00000468358 MFAP2P55001 183 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 FAM106AQ4KMX7 169 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 PLET1Q6UQ28 207 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 SELENOHQ8IZQ5 122 aaKnown RBP13.21□□□□□ -0.29
CLDN11-202ENST00000468358 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 LHFPL5Q8TAF8 219 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 VN1R17PQ8TDU5 208 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 DYNLRB2Q8TF09 96 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 TMEM230Q96A57 120 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 SRRQ9GZT4 340 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
CLDN11-202ENST00000468358 IGHV3-35A0A0C4DH35 117 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 OR2T8A6NH00 312 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 P0C879 139 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 ANXA3P12429 323 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 SNCAP37840 140 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 Q56UQ5 140 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 IL34Q6ZMJ4 242 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 FAM219AQ8IW50 185 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 PINX1Q96BK5 328 aaKnown RBP13.2□□□□□ -0.3
CLDN11-202ENST00000468358 C21orf62Q9NYP8 219 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
CLDN11-202ENST00000468358 LINC00854A0A1B0GVQ3 168 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 TGOLN2O43493 480 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 GPHB5Q86YW7 130 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 SCARB1Q8WTV0 552 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 DEDD2Q8WXF8 326 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
CLDN11-202ENST00000468358 CACNG5Q9UF02 275 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 LSM4Q9Y4Z0 139 aaKnown RBP13.19□□□□□ -0.3
CLDN11-202ENST00000468358 SMAD5-AS1Q9Y6J3 95 aa13.19□□□□□ -0.3
CLDN11-202ENST00000468358 TMEM187Q14656 261 aa13.18□□□□□ -0.3
CLDN11-202ENST00000468358 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
CLDN11-202ENST00000468358 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
CLDN11-202ENST00000468358 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
CLDN11-202ENST00000468358 SIGLEC8Q9NYZ4 499 aa13.18□□□□□ -0.3
CLDN11-202ENST00000468358 TMEM56-RWDD3S4R434 201 aa13.18□□□□□ -0.3
CLDN11-202ENST00000468358 C2orf70A6NJV1 201 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 K7EIM0 57 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 LGALS9O00182 355 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 VAMP1P23763 118 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLDN11-202ENST00000468358 BAK1Q16611 211 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 Q6ZRM9 215 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 ZNF114Q8NC26 417 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 GPR146Q96CH1 333 aa13.17□□□□□ -0.3
CLDN11-202ENST00000468358 BSCL2Q96G97 398 aaPredicted RBP13.17□□□□□ -0.3
CLDN11-202ENST00000468358 SLC25A21Q9BQT8 299 aaPredicted RBP13.17□□□□□ -0.3
CLDN11-202ENST00000468358 NXPH3O95157 252 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 MT-CO2P00403 227 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 FOLR2P14207 255 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms