RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 WT1-ASQ06250 92 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 P2RY14Q15391 338 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 PSMG4Q5JS54 123 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 PLAC9Q5JTB6 97 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 THOC7Q6I9Y2 204 aaKnown RBP7.17□□□□□ -1.26
HDAC3-203ENST00000467533 CDPF1Q6NVV7 123 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 ZNF705AQ6ZN79 300 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-203ENST00000467533 LRRTM1Q86UE6 522 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 CBR4Q8N4T8 237 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 TAS2R8Q9NYW2 309 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 AP4S1Q9Y587 144 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 PUS1Q9Y606 427 aaKnown RBP eCLIP7.17□□□□□ -1.26
HDAC3-203ENST00000467533 TRAV3A0A0B4J244 114 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 EI24O14681 340 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 SLC22A5O76082 557 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 ALPLP05186 524 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 TRAPPC2P0DI81 140 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 TRAPPC2BP0DI82 140 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 HAMPP81172 84 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 CLINT1Q14677 625 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 RCN1Q15293 331 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 DNAL1Q4LDG9 190 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 HSD17B13Q7Z5P4 300 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-203ENST00000467533 OR56B1Q8NGI3 324 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 RHOXF1Q8NHV9 184 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 CENPNQ96H22 339 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-203ENST00000467533 RAB40CQ96S21 281 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 AIFM2Q9BRQ8 373 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 HINT2Q9BX68 163 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 NXF2Q9GZY0 626 aaKnown RBP7.16□□□□□ -1.26
HDAC3-203ENST00000467533 Q9H8V8 135 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 CLEC2DQ9UHP7 191 aa7.16□□□□□ -1.26
HDAC3-203ENST00000467533 YTHDF2Q9Y5A9 579 aaKnown RBP7.16□□□□□ -1.26
HDAC3-203ENST00000467533 UPK2O00526 184 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 GYG2O15488 501 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 GNG7O60262 68 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 IGLV2-14P01704 120 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 NFYAP23511 347 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-203ENST00000467533 GNRHRP30968 328 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 MFAP4P55083 255 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 BRWD1-AS2P59051 145 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 TOMM20LQ6UXN7 152 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 SSX7Q7RTT5 188 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 CCDC197Q8NCU1 140 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 APH1BQ8WW43 257 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 LSM10Q969L4 123 aaKnown RBP7.15□□□□□ -1.26
HDAC3-203ENST00000467533 SLC25A46Q96AG3 418 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 GPHA2Q96T91 129 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 Q9H3A6 140 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 PLGRKTQ9HBL7 147 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 OR2W1Q9Y3N9 320 aa7.15□□□□□ -1.26
HDAC3-203ENST00000467533 LOC102723971A0A1B0GUV8 181 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 HELTA6NFD8 242 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 ERVFC1-1P60608 527 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-203ENST00000467533 INSL4Q14641 139 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 USF2Q15853 346 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-203ENST00000467533 SMN1Q16637 294 aaKnown RBP7.14□□□□□ -1.27
HDAC3-203ENST00000467533 DCANP1Q8TF63 244 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 PHYHIPQ92561 330 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 MISP3Q96FF7 219 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 CENPOQ9BU64 300 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 TMEM140Q9NV12 185 aa7.14□□□□□ -1.27
HDAC3-203ENST00000467533 DIMT1Q9UNQ2 313 aaKnown RBP7.14□□□□□ -1.27
HDAC3-203ENST00000467533 A0A075B6Q4 140 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 IGKV1D-8A0A087WSZ0 117 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 IGKV1D-13A0A0B4J2D9 117 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 A0A1W2PS18 150 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 IRGMA1A4Y4 181 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 TNFSF12O43508 249 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 IGHV3-48P01763 117 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 HLA-DQB1P01920 261 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 HBE1P02100 147 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 IGKV1-13P0DP09 117 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 CD37P11049 281 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 TALDO1P37837 337 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 P2RY1P47900 373 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 ALDH3B2P48448 385 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 FXYD7P58549 80 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 TAS2R31P59538 309 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 DHRS2Q13268 280 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 OGFRL1Q5TC84 451 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-203ENST00000467533 SPAG16Q8N0X2 631 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 DMBX1Q8NFW5 382 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 OR1L8Q8NGR8 309 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 RAB3CQ96E17 227 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 TXN2Q99757 166 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 ZNF586Q9NXT0 402 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 KCNK7Q9Y2U2 307 aa7.13□□□□□ -1.27
HDAC3-203ENST00000467533 TEX50A0A1B0GTY4 177 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 A0A1W2PPQ1 181 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 F5H768 121 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 H3BMM0 161 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 IGKV3-20P01619 116 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 NQO2P16083 231 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 LINC00315P59091 139 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 KCTD21Q4G0X4 260 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 ACSM3Q53FZ2 586 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms