RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 CEBPZOSA8MTT3 80 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 PF4V1P10720 104 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 DEFA4P12838 97 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 HTR2BP41595 481 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 NKX2-1P43699 371 aaPredicted RBP12.75□□□□□ -0.37
HLA-C-205ENST00000466892 BSXQ3C1V8 233 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 NOXA1Q86UR1 476 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 NECAP1Q8NC96 275 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 OR5T1Q8NG75 326 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 DTD1Q8TEA8 209 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 ASB13Q8WXK3 278 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 OR10C1Q96KK4 312 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 UBE2E2Q96LR5 201 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
HLA-C-205ENST00000466892 F11RQ9Y624 299 aaKnown RBP12.75□□□□□ -0.37
HLA-C-205ENST00000466892 U3KQ87 197 aa12.75□□□□□ -0.37
HLA-C-205ENST00000466892 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 FAM25EA8MYX2 175 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 CORTO00230 105 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 SYNGR2O43760 224 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 APELAP0DMC3 54 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 CDX1P47902 265 aaPredicted RBP12.74□□□□□ -0.37
HLA-C-205ENST00000466892 TCTEX1D4Q5JR98 221 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 NDUFA11Q86Y39 141 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 SPATA3Q8NHX4 192 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 NMES1Q9C002 83 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 RBKSQ9H477 322 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 HEYLQ9NQ87 328 aaPredicted RBP12.74□□□□□ -0.37
HLA-C-205ENST00000466892 ZNF355PQ9NSJ1 428 aa12.74□□□□□ -0.37
HLA-C-205ENST00000466892 IGLV11-55A0A075B6I3 123 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 CCSO14618 274 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 GOSR2O14653 212 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 TRGV3P03979 118 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 CD28P10747 220 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 RPP30P78346 268 aaKnown RBP12.73□□□□□ -0.37
HLA-C-205ENST00000466892 PVRIGQ6DKI7 326 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 C10orf99Q6UWK7 81 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 MED28Q9H204 178 aa12.73□□□□□ -0.37
HLA-C-205ENST00000466892 WRBO00258 174 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 RPLP1P05386 114 aaKnown RBP12.72□□□□□ -0.37
HLA-C-205ENST00000466892 TPPP2P59282 170 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 TAS2R30P59541 319 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 KRTAP10-3P60369 221 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 RPL23AP62750 156 aaKnown RBP12.72□□□□□ -0.37
HLA-C-205ENST00000466892 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
HLA-C-205ENST00000466892 IL15RAQ13261 267 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 FANCD2OSQ96PS1 177 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 ATP6V0BQ99437 205 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 P2RX4Q99571 388 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 CITED2Q99967 270 aaPredicted RBP12.72□□□□□ -0.37
HLA-C-205ENST00000466892 GSKIPQ9P0R6 139 aa12.72□□□□□ -0.37
HLA-C-205ENST00000466892 REG1AP05451 166 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 RRAS2P62070 204 aaPredicted RBP12.71□□□□□ -0.37
HLA-C-205ENST00000466892 RHOGP84095 191 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 RUNX1Q01196 453 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 KIAA0141Q14154 515 aaPredicted RBP12.71□□□□□ -0.37
HLA-C-205ENST00000466892 ZNF491Q8N8L2 437 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 C4orf3Q8WVX3 66 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 CXorf58Q96LI9 332 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 KLK15Q9H2R5 256 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 MGAT4CQ9UBM8 478 aa12.71□□□□□ -0.37
HLA-C-205ENST00000466892 COL6A5A8TX70 2615 aa12.7□□□□□ -0.38
HLA-C-205ENST00000466892 RNASE2P10153 161 aaKnown RBP12.7□□□□□ -0.38
HLA-C-205ENST00000466892 H2BFSP57053 126 aa12.7□□□□□ -0.38
HLA-C-205ENST00000466892 EXOSC2Q13868 293 aaKnown RBP12.7□□□□□ -0.38
HLA-C-205ENST00000466892 C2orf68Q2NKX9 166 aa12.7□□□□□ -0.38
HLA-C-205ENST00000466892 SPINK9Q5DT21 86 aa12.7□□□□□ -0.38
HLA-C-205ENST00000466892 RNASEH2CQ8TDP1 164 aaKnown RBP12.7□□□□□ -0.38
HLA-C-205ENST00000466892 VN1R17PQ8TDU5 208 aa12.7□□□□□ -0.38
HLA-C-205ENST00000466892 MS4A10Q96PG2 267 aa12.7□□□□□ -0.38
HLA-C-205ENST00000466892 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
HLA-C-205ENST00000466892 NXPH3O95157 252 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
HLA-C-205ENST00000466892 PET100P0DJ07 73 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 PVALBP20472 110 aaPredicted RBP12.69□□□□□ -0.38
HLA-C-205ENST00000466892 NPY1RP25929 384 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 ATP5G2Q06055 141 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 C15orf32Q32M92 178 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 Q6ZNX1 250 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 SMIM8Q96KF7 97 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 FBXL7Q9UJT9 491 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 TNCP24821 2201 aa12.69□□□□□ -0.38
HLA-C-205ENST00000466892 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 TSC22D2O75157 780 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 OR2J3O76001 311 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 SCGB1D2O95969 90 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 IFNA10P01566 189 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 PRH1P02810 166 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 LGALS1P09382 135 aaKnown RBP12.68□□□□□ -0.38
HLA-C-205ENST00000466892 POLR2GP62487 172 aaKnown RBP eCLIP12.68□□□□□ -0.38
HLA-C-205ENST00000466892 KHDC1LQ5JSQ8 128 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 SLC25A24Q6NUK1 477 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 C11orf44Q8N8P7 122 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
HLA-C-205ENST00000466892 GAR1Q9NY12 217 aaKnown RBP12.68□□□□□ -0.38
HLA-C-205ENST00000466892 RCL1Q9Y2P8 373 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms