RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 RBP4P02753 201 aa15.05■□□□□ 0
CAPN3-209ENST00000466222 ELLP55199 621 aaPredicted RBP15.05■□□□□ 0
CAPN3-209ENST00000466222 ZNF343Q6P1L6 599 aa15.05■□□□□ 0
CAPN3-209ENST00000466222 DTD1Q8TEA8 209 aa15.05■□□□□ 0
CAPN3-209ENST00000466222 SIRPDQ9H106 197 aa15.05■□□□□ 0
CAPN3-209ENST00000466222 MANBALQ9NQG1 85 aa15.05■□□□□ 0
CAPN3-209ENST00000466222 CCDC168Q8NDH2 2452 aa15.05■□□□□ 0
CAPN3-209ENST00000466222 DSCAML1Q8TD84 2053 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 FAM90A9PA6NNJ1 464 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 PMS2P5A8MQ11 134 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 IGLV1-47P01700 117 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 PRTN3P24158 256 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 FGF8P55075 233 aaPredicted RBP15.05■□□□□ -0
CAPN3-209ENST00000466222 ZNF816Q0VGE8 651 aaPredicted RBP15.05■□□□□ -0
CAPN3-209ENST00000466222 H2BFWTQ7Z2G1 175 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 WFDC11Q8NEX6 87 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 FAM210BQ96KR6 192 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 CLEC7AQ9BXN2 247 aa15.05■□□□□ -0
CAPN3-209ENST00000466222 TRBV24-1A0A075B6N3 115 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 TGIF2-C20orf24A0A0A6YYL0 155 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 C17orf112F2Z3M2 114 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 CYB5BO43169 146 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 PSMB3P49720 205 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 MEF2BQ02080 365 aaPredicted RBP15.04■□□□□ -0
CAPN3-209ENST00000466222 CYP2G1PQ6ZSU1 146 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 RPP25LQ8N5L8 163 aaKnown RBP15.04■□□□□ -0
CAPN3-209ENST00000466222 ZNF383Q8NA42 475 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 ZNF596Q8TC21 504 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 ACTR3CQ9C0K3 210 aaPredicted RBP15.04■□□□□ -0
CAPN3-209ENST00000466222 DOK5Q9P104 306 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 SEC14L6B5MCN3 397 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 TOX4O94842 621 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 CT45A6P0DMU7 189 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 CT45A5P0DMU8 189 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 CT45A7P0DMV0 189 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 OR4P4Q8NGL7 312 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 ST6GALNAC6Q969X2 333 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 TBX15Q96SF7 602 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 GSN-AS1Q9NRJ2 163 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 POLR3KQ9Y2Y1 108 aaPredicted RBP15.04■□□□□ -0
CAPN3-209ENST00000466222 INSIG2Q9Y5U4 225 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 URGCP-MRPS24S4R325 110 aa15.04■□□□□ -0
CAPN3-209ENST00000466222 FGF7P21781 194 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 S100A2P29034 98 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 NDUFA6P56556 154 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 HLA-DRB5Q30154 266 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 AARDQ4LEZ3 155 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 LINC00311Q8N616 119 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 ZNF709Q8N972 641 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 MRPL20Q9BYC9 149 aaKnown RBP15.03■□□□□ -0
CAPN3-209ENST00000466222 GAB2Q9UQC2 676 aa15.03■□□□□ -0
CAPN3-209ENST00000466222 YLPM1P49750 1951 aaKnown RBP15.03■□□□□ -0
CAPN3-209ENST00000466222 FCGR3BO75015 233 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 KBTBD11O94819 623 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 HOXB4P17483 251 aaPredicted RBP15.02■□□□□ -0
CAPN3-209ENST00000466222 ACSM6Q6P461 480 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 ZNF833PQ6ZTB9 187 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 LHFPL4Q7Z7J7 247 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 KIR3DL3Q8N743 410 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 C8orf31Q8N9H6 132 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 OR10G9Q8NGN4 311 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 OR10G7Q8NGN6 311 aa15.02■□□□□ -0
CAPN3-209ENST00000466222 BUB1B-PAK6H3BSN5 160 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 IGKV1D-33P01593 117 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 IGKV1-33P01594 117 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 MSMBP08118 114 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 MDKP21741 143 aaPredicted RBP15.02□□□□□ -0.01
CAPN3-209ENST00000466222 TMEM241Q24JQ0 296 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 C1orf122Q6ZSJ8 110 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 CIARTQ8N365 385 aaPredicted RBP15.02□□□□□ -0.01
CAPN3-209ENST00000466222 DDB2Q92466 427 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 S1PR3Q99500 378 aa15.02□□□□□ -0.01
CAPN3-209ENST00000466222 GAR1Q9NY12 217 aaKnown RBP15.02□□□□□ -0.01
CAPN3-209ENST00000466222 NOTCH2Q04721 2471 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BKO60814 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BJP06899 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BOP23527 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BBP33778 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BDP58876 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 CD81P60033 236 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BCP62807 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 RPP30P78346 268 aaKnown RBP15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST2H2BEQ16778 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-209ENST00000466222 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BHQ93079 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BNQ99877 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 HIST1H2BMQ99879 126 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 SMIM7Q9BQ49 75 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 ABCA2Q9BZC7 2435 aa15.01□□□□□ -0.01
CAPN3-209ENST00000466222 IGHV3OR16-10A0A075B7F0 116 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 IGKV1-16P04430 117 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 PRRX1P54821 245 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 PAX8Q06710 450 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 FFAR4Q5NUL3 377 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 VKORC1L1Q8N0U8 176 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 BEND2Q8NDZ0 799 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 OR11H6Q8NGC7 330 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 NPCDR1Q9BY65 106 aa15□□□□□ -0.01
CAPN3-209ENST00000466222 HIF1ANQ9NWT6 349 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms