RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 EXOSC2Q13868 293 aaKnown RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 SAMD5Q5TGI4 173 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 SLC25A24Q6NUK1 477 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 LYZL2Q7Z4W2 148 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 FAM219AQ8IW50 185 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 LGI3Q8N145 548 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 SLC35G3Q8N808 338 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 DCUN1D4Q92564 292 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 DLX4Q92988 240 aaPredicted RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 IL22RA2Q969J5 263 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 RCC1LQ96I51 464 aaKnown RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 WDR12Q9GZL7 423 aaKnown RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 RANGRFQ9HD47 186 aaPredicted RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 PEF1Q9UBV8 284 aaKnown RBP9.54□□□□□ -0.88
CHPF2-202ENST00000465601 CACNG5Q9UF02 275 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 DMRT1Q9Y5R6 373 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 S4R3C0 116 aa9.54□□□□□ -0.88
CHPF2-202ENST00000465601 MFAP2P55001 183 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 SRPXP78539 464 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 ANKRD55Q3KP44 614 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 OR2C3Q8N628 320 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 PDCD10Q9BUL8 212 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 PLEKHA3Q9HB20 300 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.53□□□□□ -0.88
CHPF2-202ENST00000465601 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
CHPF2-202ENST00000465601 F11RQ9Y624 299 aaKnown RBP9.53□□□□□ -0.88
CHPF2-202ENST00000465601 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.52□□□□□ -0.89
CHPF2-202ENST00000465601 A0A0B4J2A0 478 aa9.52□□□□□ -0.89
CHPF2-202ENST00000465601 ANXA7P20073 488 aaKnown RBP9.52□□□□□ -0.89
CHPF2-202ENST00000465601 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
CHPF2-202ENST00000465601 UBE2MP61081 183 aaKnown RBP9.52□□□□□ -0.89
CHPF2-202ENST00000465601 ERHP84090 104 aaKnown RBP9.52□□□□□ -0.89
CHPF2-202ENST00000465601 SHPKQ9UHJ6 478 aa9.52□□□□□ -0.89
CHPF2-202ENST00000465601 TBC1D24Q9ULP9 559 aa9.52□□□□□ -0.89
CHPF2-202ENST00000465601 IGHV3-21A0A0B4J1V1 117 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 C9orf170A2RU37 121 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 MFSD2BA6NFX1 497 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 OVOL1O14753 267 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 CYB5BO43169 146 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 UPK1BO75841 260 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 NXPH3O95157 252 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 DUS4LO95620 317 aaKnown RBP9.51□□□□□ -0.89
CHPF2-202ENST00000465601 TCRBP04435 133 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 OR4E1P0C645 316 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 SULT1A3P0DMM9 295 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 SULT1A4P0DMN0 295 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 ZP3P21754 424 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 SPCS3P61009 180 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 DEFA6Q01524 100 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 IFITM3Q01628 133 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 BEAN1Q3B7T3 259 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 CLEC19AQ6UXS0 136 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 EEF1AKMT3Q96AZ1 226 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 MCRIP2Q9BUT9 160 aaKnown RBP9.51□□□□□ -0.89
CHPF2-202ENST00000465601 ENY2Q9NPA8 101 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 THYN1Q9P016 225 aa9.51□□□□□ -0.89
CHPF2-202ENST00000465601 TRAV6A0A075B6T7 132 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 FAM240BA0A1B0GVZ2 78 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 SEC14L6B5MCN3 397 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 PPP5D1E7EU14 171 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 BMPR1BO00238 502 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 HOXB5P09067 269 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 HOXA1P49639 335 aaPredicted RBP9.5□□□□□ -0.89
CHPF2-202ENST00000465601 DHRS2Q13268 280 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 ASAH1Q13510 395 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 SMCO1Q147U7 214 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 AARDQ4LEZ3 155 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 C4orf46Q504U0 113 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 LRTM2Q8N967 370 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 OR1L6Q8NGR2 347 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 OR1P1Q8NH06 330 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 OR52E5Q8NH55 327 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 CXorf58Q96LI9 332 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 CCDC140Q96MF4 163 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 C20orf85Q9H1P6 137 aa9.5□□□□□ -0.89
CHPF2-202ENST00000465601 PIGBOS1A0A0B4J2F0 54 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 DUXBA0A1W2PPF3 345 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 CEBPZOSA8MTT3 80 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 HLA-AP01891 365 aaKnown RBP9.49□□□□□ -0.89
CHPF2-202ENST00000465601 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
CHPF2-202ENST00000465601 CLEC3BP05452 202 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 SNCAP37840 140 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 SYNJ2BPP57105 145 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 KLF5Q13887 457 aaPredicted RBP9.49□□□□□ -0.89
CHPF2-202ENST00000465601 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
CHPF2-202ENST00000465601 C9orf66Q5T8R8 295 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 VN1R17PQ8TDU5 208 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 SCARB1Q8WTV0 552 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 MISP3Q96FF7 219 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 GPR61Q9BZJ8 451 aa9.49□□□□□ -0.89
CHPF2-202ENST00000465601 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
CHPF2-202ENST00000465601 A0A1B0GU03 582 aa9.48□□□□□ -0.89
CHPF2-202ENST00000465601 K7EIM0 57 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms