RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NAV3Q8IVL0 2385 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 SVEP1Q4LDE5 3571 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 ANK3Q12955 4377 aaKnown RBP8.05□□□□□ -1.12
PTPRD-207ENST00000463477 TRAV38-1A0A0B4J264 116 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 ZNF727A8MUV8 499 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 AP4M1O00189 453 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 OPN1MWP04001 364 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 SMIM6P0DI80 62 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 OPN1MW2P0DN77 364 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 OPN1MW3P0DN78 364 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 SELLP14151 372 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 RPL35P42766 123 aaKnown RBP8.05□□□□□ -1.12
PTPRD-207ENST00000463477 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-207ENST00000463477 MEOX2P50222 304 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 CEBPGP53567 150 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 TREML4Q6UXN2 200 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 C1orf229Q6ZS94 237 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-207ENST00000463477 C1orf87Q8N0U7 546 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 C8orf31Q8N9H6 132 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 Q8WTZ3 238 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 C1orf159Q96HA4 380 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 RHOVQ96L33 236 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 SLC25A22Q9H936 323 aa8.05□□□□□ -1.12
PTPRD-207ENST00000463477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPRD-207ENST00000463477 TRBV24-1A0A075B6N3 115 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 VENTXO95231 258 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 IFNA10P01566 189 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 ERVFRD-1P60508 538 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 S100A12P80511 92 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 TMEM241Q24JQ0 296 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 FAM201AQ5SY85 155 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 OR4A47Q6IF82 309 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 FAM71F2Q6NXP2 309 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 ZNF383Q8NA42 475 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 TIMD4Q96H15 378 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 CCL13Q99616 98 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 SMIM7Q9BQ49 75 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 GAL3ST2Q9H3Q3 398 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 NPVFQ9HCQ7 196 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
PTPRD-207ENST00000463477 LSM4Q9Y4Z0 139 aaKnown RBP8.04□□□□□ -1.12
PTPRD-207ENST00000463477 JMJD1CQ15652 2540 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 TRAV3A0A0B4J244 114 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 RRHO14718 337 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 TNFRSF13BO14836 293 aaPredicted RBP8.03□□□□□ -1.12
PTPRD-207ENST00000463477 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRD-207ENST00000463477 GYPAP02724 150 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 LMO4P61968 165 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 ZNF833PQ6ZTB9 187 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 SSX9Q7RTT3 188 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 ZNF596Q8TC21 504 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 TMEM170AQ8WVE7 144 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 NEIL1Q96FI4 390 aaPredicted RBP8.03□□□□□ -1.12
PTPRD-207ENST00000463477 C12orf57Q99622 126 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 TMEM106BQ9NUM4 274 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 TMEM160Q9NX00 188 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 FKBP11Q9NYL4 201 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 BET1LQ9NYM9 111 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 MALRD1Q5VYJ5 2156 aa8.03□□□□□ -1.12
PTPRD-207ENST00000463477 A0A1W2PPE3 182 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 INAFM1C9JVW0 142 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 PDE6DO43924 150 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 FSTL3O95633 263 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 CXCL1P09341 107 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
PTPRD-207ENST00000463477 NPY1RP25929 384 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 RPS10P46783 165 aaKnown RBP8.02□□□□□ -1.13
PTPRD-207ENST00000463477 FABP9Q0Z7S8 132 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 RTL8BQ17RB0 113 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 SPINK9Q5DT21 86 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 DUX4L9Q6RFH8 374 aaPredicted RBP8.02□□□□□ -1.13
PTPRD-207ENST00000463477 LYG1Q8N1E2 194 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 LINC00311Q8N616 119 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 FAM216BQ8N7L0 139 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 SLC24A4Q8NFF2 622 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 PYGO2Q9BRQ0 406 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 YAE1D1Q9NRH1 226 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 B4DSR2 109 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 F6UZH7 168 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 TMEM178BH3BS89 294 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 UPK2O00526 184 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 YIF1AO95070 293 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 TGFAP01135 160 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 STAG3L2P0CL84 134 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 STAG3L3P0CL85 134 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 CT45A6P0DMU7 189 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 CT45A5P0DMU8 189 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 CT45A7P0DMV0 189 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 RPL29P47914 159 aaKnown RBP8.02□□□□□ -1.13
PTPRD-207ENST00000463477 PRCDQ00LT1 54 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 BSXQ3C1V8 233 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 UTF1Q5T230 341 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 ZNF343Q6P1L6 599 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 VKORC1L1Q8N0U8 176 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 DEFB108BQ8NET1 73 aa8.02□□□□□ -1.13
PTPRD-207ENST00000463477 OSR1Q8TAX0 266 aaPredicted RBP8.02□□□□□ -1.13
PTPRD-207ENST00000463477 ANAPC16Q96DE5 110 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms