RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TMEM155Q4W5P6 130 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 IBA57Q5T440 356 aaKnown RBP1.36□□□□□ -2.19
VCL-203ENST00000461383 AADACL3Q5VUY0 350 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 SLC36A1Q7Z2H8 476 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 KRT222Q8N1A0 295 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 BTF3L4Q96K17 158 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 GINS4Q9BRT9 223 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 TMEM147Q9BVK8 224 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 DCSTAMPQ9H295 470 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 C11orf68Q9H3H3 251 aaKnown RBP1.36□□□□□ -2.19
VCL-203ENST00000461383 FBXL12Q9NXK8 326 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 MRPL27Q9P0M9 148 aaKnown RBP1.36□□□□□ -2.19
VCL-203ENST00000461383 FBXO5Q9UKT4 447 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 ARL2BPQ9Y2Y0 163 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 PRELID3BQ9Y3B1 194 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 TMEM56-RWDD3S4R434 201 aa1.36□□□□□ -2.19
VCL-203ENST00000461383 ADGRB3O60242 1522 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 RP1P56715 2156 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 MTUS2Q5JR59 1369 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 CR1P17927 2039 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 DOCK3Q8IZD9 2030 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 TRIOBPQ9H2D6 2365 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 A0A087WUJ7 227 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 A0A0D9SEW6 157 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 EXOC1LA0A1B0GW35 172 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 DPRXA6NFQ7 191 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 ZNF705FA8MVS1 300 aaPredicted RBP1.35□□□□□ -2.19
VCL-203ENST00000461383 PIRO00625 290 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 CNIH1O95406 144 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 IFNA6P05013 189 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 EVX1P49640 407 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 RPS20P60866 119 aaKnown RBP1.35□□□□□ -2.19
VCL-203ENST00000461383 BASP1P80723 227 aaKnown RBP1.35□□□□□ -2.19
VCL-203ENST00000461383 TMED2Q15363 201 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 TMEM97Q5BJF2 176 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 FAM27BQ5VT28 67 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 BPIFA4PQ86YQ2 179 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 DYNAPQ8N1N2 210 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 C10orf126Q8N4M7 172 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 DNAJC9Q8WXX5 260 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 NIPSNAP1Q9BPW8 284 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 DERL1Q9BUN8 251 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 KIFC1Q9BW19 673 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 MICAL3Q7RTP6 2002 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 CCDC88CQ9P219 2028 aa1.35□□□□□ -2.19
VCL-203ENST00000461383 MEIKINA0A087WXM9 373 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 TRAV26-2A0A0B4J265 109 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 TRBV10-2A0A0K0K1G8 114 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 FAM236DA0A1B0GTK5 79 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 MEIS3P1A6NDR6 274 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 J3QKU1 62 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 IFNA10P01566 189 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 CTXN2P0C2S0 81 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 FAM236CP0DP71 79 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 AQP4P55087 323 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 HIST1H3AP68431 136 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 H3F3AP84243 136 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 SPANXN3Q5MJ09 141 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 OR6V1Q8N148 313 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 WFDC11Q8NEX6 87 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 OR13C4Q8NGS5 318 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 CT55Q8WUE5 264 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 TMEM106AQ96A25 262 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 TOMM6Q96B49 74 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 DGCR14Q96DF8 476 aaKnown RBP1.34□□□□□ -2.19
VCL-203ENST00000461383 SCGB3A1Q96QR1 104 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 NMNAT1Q9HAN9 279 aaPredicted RBP1.34□□□□□ -2.19
VCL-203ENST00000461383 HEATR5BQ9P2D3 2071 aa1.34□□□□□ -2.19
VCL-203ENST00000461383 NUP155O75694 1391 aa1.34□□□□□ -2.2
VCL-203ENST00000461383 ECM29Q5VYK3 1845 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 MYOFQ9NZM1 2061 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 ZFYVE9O95405 1425 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 CUL9Q8IWT3 2517 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 ZNF106Q9H2Y7 1883 aaKnown RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 BAZ2BQ9UIF8 2168 aaKnown RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 hADV38S2A0JD32 116 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 SDCBPO00560 298 aaPredicted RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 PDE6DO43924 150 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 FADS1O60427 444 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 RBP1P09455 135 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 METTL15P1P0C7V9 234 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 S100A4P26447 101 aaKnown RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 FXYD2P54710 66 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 SUPT4H1P63272 117 aaKnown RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 IAH1Q2TAA2 248 aaPredicted RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 DPPA3Q6W0C5 159 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 AAED1Q7RTV5 226 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 GDPD1Q8N9F7 314 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 OR51A2Q8NGJ7 313 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 RASSF5Q8WWW0 418 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 C11orf40Q8WZ69 217 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 H1FXQ92522 213 aaKnown RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 PRAP1Q96NZ9 151 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 TSPAN32Q96QS1 320 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 PHB2Q99623 299 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 SIGMAR1Q99720 223 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 SLC39A9Q9NUM3 307 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms