RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 OR5B21A6NL26 309 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 IFITM5A6NNB3 132 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 G3V4G9 280 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 J3QLW9 94 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 M0R036 132 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 M0R135 149 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 P2RY10O00398 339 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 SLC17A3O00476 420 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ARPC1BO15143 372 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 RBFOX2O43251 390 aaKnown RBP eCLIP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 LANCL1O43813 399 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 OR7C2O60412 319 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 SRSF10O75494 262 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 IFNA5P01569 189 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 IGHV4-39P01824 125 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 TFF1P04155 84 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 H2BFMP0C1H6 154 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 TRGC1P0CF51 173 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 LIMS3P0CW19 117 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 LIMS4P0CW20 117 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF19P17023 458 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 TUBG1P23258 451 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 GLRXP35754 106 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 SULT1A2P50226 295 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 RND2P52198 227 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 RPS23P62266 143 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 CX3CL1P78423 397 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF415Q09FC8 603 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 RAB40BQ12829 278 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 PSG7Q13046 419 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF154Q13106 437 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 GGTLC2Q14390 218 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 MEF2DQ14814 521 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ACOT6Q3I5F7 207 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 PHLDA2Q53GA4 152 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 SPIN3Q5JUX0 258 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF684Q5T5D7 378 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 GPR157Q5UAW9 335 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 PRSS54Q6PEW0 395 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 C18orf65Q6ZTR6 163 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 Q71RC1 249 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 CIARTQ8N365 385 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 MUC15Q8N387 334 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 WFDC11Q8NEX6 87 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 OR8B12Q8NGG6 310 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 KLF14Q8TD94 323 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 CACNG8Q8WXS5 425 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 MRPL24Q96A35 216 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ISOC2Q96AB3 205 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 MRAP2Q96G30 205 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF799Q96GE5 643 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 CCL19Q99731 98 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 MICU1Q9BPX6 476 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 SLC25A21Q9BQT8 299 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 FGF23Q9GZV9 251 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 YAE1D1Q9NRH1 226 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 TUBG2Q9NRH3 451 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 FAM206AQ9NX38 181 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 FKBP11Q9NYL4 201 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 BET1LQ9NYM9 111 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF230Q9UIE0 474 aaPredicted RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 RAB22AQ9UL26 194 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 C14orf166Q9Y224 244 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 OR51B2Q9Y5P1 312 aa3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 ANK3Q12955 4377 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-203ENST00000460928 DYSFO75923 2080 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 TRAV26-1A0A087WT03 109 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 TRAV25A0A0B4J276 109 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 DAPL1A0PJW8 107 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 TMEM235A6NFC5 223 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 HELTA6NFD8 242 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 ZNF878C9JN71 531 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 K7EPK0 472 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 MLNRO43193 412 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 SCGNO76038 276 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 GAPDHP04406 335 aaKnown RBP3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CSN2P05814 226 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 PGAM2P15259 253 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CR1P17927 2039 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 KITLGP21583 273 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CA6P23280 308 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 COL8A2P25067 703 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 MT3P25713 68 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 S100GP29377 79 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 RAB9AP51151 201 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 ATP5J2P56134 94 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 H2BFSP57053 126 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CKS1BP61024 79 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 UBE2KP61086 200 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CCL8P80075 99 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CYCSP99999 105 aaKnown RBP3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 ELOBQ15370 118 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 DEFB113Q30KQ7 82 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 CEACAM21Q3KPI0 293 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 C5orf47Q569G3 176 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 WDR38Q5JTN6 314 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 FAM201AQ5SY85 155 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 MALRD1Q5VYJ5 2156 aa3.91□□□□□ -1.78
ATPAF1-203ENST00000460928 TOMM20LQ6UXN7 152 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 345.9 ms