RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 HSPB9Q9BQS6 159 aa4.41□□□□□ -1.7
PTPN12-209ENST00000460731 NDUFA4L2Q9NRX3 87 aa4.41□□□□□ -1.7
PTPN12-209ENST00000460731 TMEM140Q9NV12 185 aa4.41□□□□□ -1.7
PTPN12-209ENST00000460731 FKBP11Q9NYL4 201 aa4.41□□□□□ -1.7
PTPN12-209ENST00000460731 KIAA1456Q9P272 454 aa4.41□□□□□ -1.7
PTPN12-209ENST00000460731 PRNDQ9UKY0 176 aa4.41□□□□□ -1.7
PTPN12-209ENST00000460731 FOXA2Q9Y261 457 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-209ENST00000460731 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.7
PTPN12-209ENST00000460731 TRAV6A0A075B6T7 132 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 TEX50A0A1B0GTY4 177 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 IGLC7A0M8Q6 106 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 C15orf61A6NNL5 157 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 TEX22C9J3V5 150 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 FAM90A26D6RGX4 464 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 AP4M1O00189 453 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 DHFRP00374 187 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 IGHG4P01861 327 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 HLA-AP01891 365 aaKnown RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 OR9G9P0C7N8 305 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 ERVK-16P61578 105 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 HSPE1P61604 102 aaKnown RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 KIAA0141Q14154 515 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 FXYD3Q14802 87 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 BSXQ3C1V8 233 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 ASPHD1Q5U4P2 390 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 THOC7Q6I9Y2 204 aaKnown RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 Q6ZNX1 250 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 H2BFWTQ7Z2G1 175 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 HSD17B13Q7Z5P4 300 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 ZNF695Q8IW36 515 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 C12orf45Q8N5I9 185 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 TTC9CQ8N5M4 171 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 OR1L8Q8NGR8 309 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 OR4F5Q8NH21 305 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 COQ8AQ8NI60 647 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 PHB2Q99623 299 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 SPIN2AQ99865 258 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 SPIN2BQ9BPZ2 258 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-209ENST00000460731 FBXO7Q9Y3I1 522 aa4.4□□□□□ -1.71
PTPN12-209ENST00000460731 MGAM2Q2M2H8 2515 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TRBV9A0A0B4J1U6 114 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 MSGN1A6NI15 193 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 NPIPB5A8MRT5 1133 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 H3BUA1 57 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 ATP6V0E1O15342 81 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 SOX15O60248 233 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 CA2P00918 260 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 CRYBA1P05813 215 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 CTRB1P17538 263 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 PSMB8P28062 276 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 VDAC2P45880 294 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 ATP5IP56385 69 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 RAB25P57735 213 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 SPCS3P61009 180 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 PRCDQ00LT1 54 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TMEM267Q0VDI3 215 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 SMCO1Q147U7 214 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TATDN3Q17R31 274 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 IZUMO4Q1ZYL8 232 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TRIM16LQ309B1 348 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 C4orf46Q504U0 113 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TCTEX1D4Q5JR98 221 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 GGNBP1Q5YKI7 109 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 STPG2Q8N412 459 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 COMMD1Q8N668 190 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 ZNF114Q8NC26 417 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 DMBX1Q8NFW5 382 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 OR52B4Q8NGK2 314 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 OR4D5Q8NGN0 318 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 OR2T6Q8NHC8 308 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 SRSF12Q8WXF0 261 aaKnown RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TMEM158Q8WZ71 300 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 RRNAD1Q96FB5 475 aaKnown RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 SEC22CQ9BRL7 303 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 GON7Q9BXV9 100 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 BEX1Q9HBH7 125 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 GPN1Q9HCN4 374 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TNFRSF19Q9NS68 423 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 HSPB7Q9UBY9 170 aa4.39□□□□□ -1.71
PTPN12-209ENST00000460731 TRRAPQ9Y4A5 3859 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 TRAV41A0A0B4J266 112 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 SH2D7A6NKC9 451 aaPredicted RBP4.38□□□□□ -1.71
PTPN12-209ENST00000460731 MPTX1A8MV57 137 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 ST8SIA3O43173 380 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 ADAP1O75689 374 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 SNAPC5O75971 98 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 LY86O95711 162 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 ELANEP08246 267 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 TRAPPC2P0DI81 140 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 TRAPPC2BP0DI82 140 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 SULT1A3P0DMM9 295 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 SULT1A4P0DMN0 295 aa4.38□□□□□ -1.71
PTPN12-209ENST00000460731 MDKP21741 143 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms