RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ID3Q02535 119 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 EXOSC2Q13868 293 aaKnown RBP8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 C10orf55Q5SWW7 151 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 Q6ZRM9 215 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 Q8N3U1 123 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 ZBTB8BQ8NAP8 495 aaPredicted RBP8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 ZNF114Q8NC26 417 aa8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 NOL4LQ96MY1 436 aaPredicted RBP8.66□□□□□ -1.02
SMNDC1-203ENST00000460483 A0A0G2JRQ6 117 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 IGLC7A0M8Q6 106 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 TEX22C9J3V5 150 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 SCGB1D2O95969 90 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 IGLV1-40P01703 118 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 CTRB1P17538 263 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 PPIFP30405 207 aaKnown RBP8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 NDPQ00604 133 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 IZUMO4Q1ZYL8 232 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 CTRB2Q6GPI1 263 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 Q6ZS46 218 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 ZNF329Q86UD4 541 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 OR2C3Q8N628 320 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 SLC24A4Q8NFF2 622 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 OR5T1Q8NG75 326 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 OR4D5Q8NGN0 318 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 ATP6V0BQ99437 205 aa8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 TSSC4Q9Y5U2 329 aaPredicted RBP8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.02
SMNDC1-203ENST00000460483 NIPBLQ6KC79 2804 aaeCLIP8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 TCRBV4S1A1TA0A5B7 111 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 HMX3A6NHT5 357 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 G3V318 75 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 TRGV3P03979 118 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 PSMB8P28062 276 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 RAB9AP51151 201 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 TPPP2P59282 170 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 SSBP2P81877 361 aaPredicted RBP8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 CFHR3Q02985 330 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 ATP5G2Q06055 141 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 RNF152Q8N8N0 203 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 OR10C1Q96KK4 312 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 RBKSQ9H477 322 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 LINC00527Q9UJ94 153 aa8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 STRAPQ9Y3F4 350 aaKnown RBP8.64□□□□□ -1.03
SMNDC1-203ENST00000460483 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 E5RGE8 158 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 CCSO14618 274 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 TSC22D2O75157 780 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 IFNA4P05014 189 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 GIPP09681 153 aaPredicted RBP8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 OR8U8P0C7N1 319 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 NPY1RP25929 384 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 NUP62P37198 522 aaPredicted RBP8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 CDX1P47902 265 aaPredicted RBP8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 S100A10P60903 97 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 RAP2BP61225 183 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 RHOGP84095 191 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 SRSF2Q01130 221 aaKnown RBP8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 WT1-ASQ06250 92 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 TMEM95Q3KNT9 176 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 C19orf54Q5BKX5 351 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 STX12Q86Y82 276 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 OR10W1Q8NGF6 305 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 THAP6Q8TBB0 222 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 VN1R17PQ8TDU5 208 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 DCUN1D4Q92564 292 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 EEF1AKMT3Q96AZ1 226 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 RBMXL1Q96E39 390 aaKnown RBP8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 SMIM8Q96KF7 97 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 ZNF436Q9C0F3 470 aaPredicted RBP8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 SLC25A31Q9H0C2 315 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 FBXO7Q9Y3I1 522 aa8.63□□□□□ -1.03
SMNDC1-203ENST00000460483 ANK3Q12955 4377 aaKnown RBP8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 MPTX1A8MV57 137 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 NUDT19A8MXV4 375 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 SSSCA1O60232 199 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 APELAP0DMC3 54 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 SLC25A4P12235 298 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 AREGP15514 252 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 BCAP31P51572 246 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 SRSF4Q08170 494 aaKnown RBP8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 KLK9Q2XQG4 91 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 Q6ZNX1 250 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 CACNG8Q8WXS5 425 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 MS4A10Q96PG2 267 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 P2RX4Q99571 388 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 TXN2Q99757 166 aa8.62□□□□□ -1.03
SMNDC1-203ENST00000460483 PSENENQ9NZ42 101 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms