RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 AJUBAQ96IF1 538 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC25A32Q9H2D1 315 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 PARP11Q9NR21 331 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 NDUFA4L2Q9NRX3 87 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 FBXL17Q9UF56 701 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 CDC42EP3Q9UKI2 254 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 TRAV3A0A0B4J244 114 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 A0A0G2JLM5 398 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 UBE2L5PA0A1B0GUS4 154 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 IGSF23A1L1A6 192 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 RNF222A6NCQ9 220 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZFP92A6NM28 416 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF705EA8MWA4 302 aaPredicted RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 NUDT19A8MXV4 375 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 INS-IGF2F8WCM5 200 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 AP4M1O00189 453 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 GNG7O60262 68 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 CFDP00746 253 aaPredicted RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 HLA-DRB1P01911 266 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 HBE1P02100 147 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 P0C879 139 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 SELENOTP62341 195 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 CX3CL1P78423 397 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 AARDQ4LEZ3 155 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 AKIRIN2Q53H80 203 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 FAM120AOSQ5T036 256 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 PXDC1Q5TGL8 231 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 RPL7L1Q6DKI1 246 aaKnown RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 ACSM6Q6P461 480 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM14EPQ6UXP3 125 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 DPPA3Q6W0C5 159 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF680Q8NEM1 530 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR1P1Q8NH06 330 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 RBMXL1Q96E39 390 aaKnown RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 NARS2Q96I59 477 aaKnown RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 CXorf58Q96LI9 332 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 RNF2Q99496 336 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 PBDC1Q9BVG4 233 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 C19orf24Q9BVV8 132 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 PARD6GQ9BYG4 376 aaPredicted RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 WNT10AQ9GZT5 417 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 PLSCR3Q9NRY6 295 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 TNFRSF19Q9NS68 423 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM160Q9NX00 188 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 BOLA1Q9Y3E2 137 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 KMT2BQ9UMN6 2715 aaPredicted RBP4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 ITPR1Q14643 2758 aa4.67□□□□□ -1.66
RNU1-88P-201ENST00000459274 ASPMQ8IZT6 3477 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRRC2AP48634 2157 aaKnown RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 TSPAN15O95858 294 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 IFNA1P01562 189 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 IL6RP08887 468 aaPredicted RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 CNTFRP26992 372 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 VDAC2P45880 294 aaPredicted RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 IER3P46695 156 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 MFAP4P55083 255 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF616Q08AN1 781 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 PJVKQ0ZLH3 352 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 ECSCRQ19T08 205 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 TUSC1Q2TAM9 212 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 DEFB112Q30KQ8 113 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 Q56UQ5 140 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 LAMTOR1Q6IAA8 161 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 BTNL8Q6UX41 500 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 CLEC9AQ6UXN8 241 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 Q6YL49 198 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 C9orf139Q6ZV77 190 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 CENPVQ7Z7K6 275 aaPredicted RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM219Q86XT9 240 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 STPG2Q8N412 459 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM86BQ8N661 226 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 LFNGQ8NES3 379 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR10W1Q8NGF6 305 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR2T6Q8NHC8 308 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 SGMS2Q8NHU3 365 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMED6Q8WW62 240 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 SAT2Q96F10 170 aaPredicted RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 ACY3Q96HD9 319 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 PFDN5Q99471 154 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 GINS3Q9BRX5 216 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 PSMG3Q9BT73 122 aaPredicted RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 ACTR3CQ9C0K3 210 aaPredicted RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC39A9Q9NUM3 307 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 VPREB3Q9UKI3 123 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 TIMM9Q9Y5J7 89 aa4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 F11RQ9Y624 299 aaKnown RBP4.66□□□□□ -1.66
RNU1-88P-201ENST00000459274 SPG11Q96JI7 2443 aa4.65□□□□□ -1.66
RNU1-88P-201ENST00000459274 MED13LQ71F56 2210 aa4.65□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZFYVE26Q68DK2 2539 aa4.65□□□□□ -1.66
RNU1-88P-201ENST00000459274 A0A096LNT2 108 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TRBV7-1A0A0A6YYK4 115 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TRAV41A0A0B4J266 112 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 NPIPB5A8MRT5 1133 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 NUPL2O15504 423 aaKnown RBP4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 REG1AP05451 166 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 CRYGBP07316 175 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 H2AFB1P0C5Y9 115 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 APELAP0DMC3 54 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 PPT1P50897 306 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms