RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 MFSD12Q6NUT3 480 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 SSX8Q7RTT4 187 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 MOB3BQ86TA1 216 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 TEN1Q86WV5 123 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 OSR2Q8N2R0 312 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF808Q8N4W9 903 aaPredicted RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 NUP35Q8NFH5 326 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 OR52N5Q8NH56 324 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 NEU4Q8WWR8 484 aaPredicted RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 KLK6Q92876 244 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 DLX4Q92988 240 aaPredicted RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 C11orf52Q96A22 123 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF689Q96CS4 500 aaPredicted RBP4.63□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF503Q96F45 646 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 PRELID3AQ96N28 172 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 SPON2Q9BUD6 331 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 ULBP3Q9BZM4 244 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 OBP2BQ9NPH6 170 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 TNFRSF19Q9NS68 423 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 HRASLS2Q9NWW9 162 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 PRR13Q9NZ81 148 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 HIGD1AQ9Y241 93 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF835Q9Y2P0 537 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 KLF12Q9Y4X4 402 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 SCN1AP35498 2009 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 CCDC88CQ9P219 2028 aa4.63□□□□□ -1.67
HMGB4-202ENST00000458277 SCN2AQ99250 2005 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 A0A0A6YYD5 115 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 TRAV5A0A0B4J249 113 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF816-ZNF321PA0A0X1KG74 233 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 A0A1B0GWA3 101 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 PRSS29PA6NIE9 313 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 C2CD4DB7Z1M9 353 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 H3BML4 177 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 RS1O15537 224 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 IGLV3-27P01718 113 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 LGALS2P05162 132 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 CA3P07451 260 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 CSN3P07498 182 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 ASAH2BP0C7U1 165 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 NHLRC4P0CG21 123 aaPredicted RBP4.62□□□□□ -1.67
HMGB4-202ENST00000458277 C8orf89P0DMQ9 161 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 CPMP14384 443 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 ZNF823P16415 610 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 GLRXP35754 106 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 SSR2P43308 183 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 XGP55808 180 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 SEC61GP60059 68 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 GNB1P62873 340 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 PSG4Q00888 419 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 COL9A2Q14055 689 aaPredicted RBP4.62□□□□□ -1.67
HMGB4-202ENST00000458277 WFDC2Q14508 124 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 PRSS53Q2L4Q9 553 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 LGALS9BQ3B8N2 356 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 KIAA1644Q3SXP7 199 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 LYSMD4Q5XG99 296 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 LGALS9CQ6DKI2 356 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 SLC48A1Q6P1K1 146 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 Q6P435 159 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 AMTNQ6UX39 209 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 RBPMS2Q6ZRY4 209 aaKnown RBP4.62□□□□□ -1.67
HMGB4-202ENST00000458277 FAM19A2Q8N3H0 131 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 RPP25LQ8N5L8 163 aaKnown RBP4.62□□□□□ -1.67
HMGB4-202ENST00000458277 KIR2DL5BQ8NHK3 375 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 RDH5Q92781 318 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 MMABQ96EY8 250 aaPredicted RBP4.62□□□□□ -1.67
HMGB4-202ENST00000458277 SLC35A4Q96G79 324 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 ARHGAP5-AS1Q96IT6 56 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 RASL11BQ9BPW5 248 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 SLC25A2Q9BXI2 301 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 OR2H1Q9GZK4 316 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 S1PR5Q9H228 398 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 PSENENQ9NZ42 101 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 HTTP42858 3142 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 PLXNA1Q9UIW2 1896 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 KIF26AQ9ULI4 1882 aaPredicted RBP4.62□□□□□ -1.67
HMGB4-202ENST00000458277 HEATR5AQ86XA9 2040 aa4.62□□□□□ -1.67
HMGB4-202ENST00000458277 NUP214P35658 2090 aaPredicted RBP4.61□□□□□ -1.67
HMGB4-202ENST00000458277 hDV102S1A0JD36 115 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 MYBPHLA2RUH7 354 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 LINC01553A4QN01 128 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 FOXI3A8MTJ6 420 aaPredicted RBP4.61□□□□□ -1.67
HMGB4-202ENST00000458277 TNFSF12O43508 249 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 SYNGR2O43760 224 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 PDCD6O75340 191 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 NKX2-2O95096 273 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 C1orf105O95561 183 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 NAPSAO96009 420 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 CRYGDP07320 174 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 JMJD7P0C870 316 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 SCGB1C2P0DMR2 95 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 EGR1P18146 543 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 PGFP49763 221 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 MEOX1P50221 254 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 DAP3P51398 398 aaKnown RBP4.61□□□□□ -1.67
HMGB4-202ENST00000458277 CTXN1P60606 82 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 RPL30P62888 115 aaKnown RBP4.61□□□□□ -1.67
HMGB4-202ENST00000458277 FHL1Q13642 323 aa4.61□□□□□ -1.67
HMGB4-202ENST00000458277 MBNL2Q5VZF2 373 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms