RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 BCL6BQ8N143 479 aaPredicted RBP4.21□□□□□ -1.73
PCDH9-203ENST00000456367 FOXC2Q99958 501 aa4.21□□□□□ -1.73
PCDH9-203ENST00000456367 C1RLQ9NZP8 487 aa4.21□□□□□ -1.73
PCDH9-203ENST00000456367 MRPS18CQ9Y3D5 142 aaKnown RBP4.21□□□□□ -1.73
PCDH9-203ENST00000456367 LOC285556D6RIA3 1793 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 COL4A1P02462 1669 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 TMSB15BA0A087X1C1 80 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 M0R1B8 84 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 SNAI2O43623 268 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 SYNGR3O43761 229 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 EFNB3Q15768 340 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 FBXW9Q5XUX1 488 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 STPG4Q8N801 248 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 C1QTNF5Q9BXJ0 243 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 GFRA4Q9GZZ7 299 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 EPDR1Q9UM22 224 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 IGLC7A0M8Q6 106 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 SPRY3O43610 288 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 MT-CO3P00414 261 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 GUSBP1Q15486 140 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 PSG3Q16557 428 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.21□□□□□ -1.74
PCDH9-203ENST00000456367 MIR17HGQ75NE6 70 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 NPIPB11E5RHQ5 1161 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 CCL2P13500 99 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 IGFBP2P18065 325 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 CACNG7P62955 275 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 KLF17Q5JT82 389 aaPredicted RBP4.21□□□□□ -1.74
PCDH9-203ENST00000456367 DEFB125Q8N687 156 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 PLA2G3Q9NZ20 509 aa4.21□□□□□ -1.74
PCDH9-203ENST00000456367 TRBV20OR9-2A0A075B6H5 130 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TRBV20-1A0A075B6N2 111 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 IGKV1D-8A0A087WSZ0 117 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 A0A087X0K7 114 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 IGKV1D-13A0A0B4J2D9 117 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 AHRRA9YTQ3 701 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 M0QZ24 198 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 IGKV1-13P0DP09 117 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TAL2Q16559 108 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 MORN2Q502X0 79 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 CT83Q5H943 113 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 C16orf47Q6ZP98 133 aaPredicted RBP4.2□□□□□ -1.74
PCDH9-203ENST00000456367 GOLT1AQ6ZVE7 132 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 LINC00305Q7Z4B0 112 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 FAM90A1Q86YD7 464 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 GPHA2Q96T91 129 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 GGTLC1Q9BX51 225 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 DEFB127Q9H1M4 99 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 CALYQ9NYX4 217 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 IDI2-AS1Q9NZ38 188 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TRPM6Q9BX84 2022 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 SIP14410 1827 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 CCL25O15444 150 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 COX8AP10176 69 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 CDKN1AP38936 164 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 PRSS12P56730 875 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 OR4C13Q8NGP0 309 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 ZDHHC16Q969W1 377 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 KIR2DL4Q99706 377 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 MGST2Q99735 147 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 SIPA1L1O43166 1804 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 SCN2AQ99250 2005 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TRGV8A0A0C4DH27 118 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 SP9P0CG40 484 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 GFRA1P56159 465 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 ORMDL2Q53FV1 153 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 LCN12Q6JVE5 192 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 PPDPFLQ8WWR9 84 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 ADAMTSL1Q8N6G6 1762 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TRAV5A0A0B4J249 113 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 C17orf98A8MV24 154 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 NPIPB6E9PJ23 425 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 TOMM40O96008 361 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 MGPP08493 103 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 PLNP26678 52 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 FOXL2P58012 376 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 NXPH1P58417 271 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 CSRP2Q16527 193 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 NPIPB3Q92617 1050 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 COQ2Q96H96 371 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 SCGB3A1Q96QR1 104 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 CNTRLQ7Z7A1 2325 aa4.2□□□□□ -1.74
PCDH9-203ENST00000456367 PLXNA1Q9UIW2 1896 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 SPAG17Q6Q759 2223 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 IGLV3-32A0A0A0MS00 114 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 C12orf77C9JDV5 145 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 ZNF83P51522 516 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 SRSF1Q07955 248 aaKnown RBP eCLIP4.19□□□□□ -1.74
PCDH9-203ENST00000456367 MBNL2Q5VZF2 373 aaKnown RBP4.19□□□□□ -1.74
PCDH9-203ENST00000456367 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
PCDH9-203ENST00000456367 ASCL4Q6XD76 172 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 MOGAT3Q86VF5 341 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 SYT8Q8NBV8 401 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 C18orf32Q8TCD1 76 aa4.19□□□□□ -1.74
PCDH9-203ENST00000456367 RSPO3Q9BXY4 272 aaPredicted RBP4.19□□□□□ -1.74
PCDH9-203ENST00000456367 GP6Q9HCN6 339 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms