RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PSMB6P28072 239 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 TMEM267Q0VDI3 215 aaPredicted RBP12.16□□□□□ -0.46
VCX3B-204ENST00000453306 IL15RAQ13261 267 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 OXLD1Q5BKU9 147 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
VCX3B-204ENST00000453306 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 HSPB7Q9UBY9 170 aa12.16□□□□□ -0.46
VCX3B-204ENST00000453306 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 IFNA17P01571 189 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 SPCS3P61009 180 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 ID3Q02535 119 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 FOXE3Q13461 319 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 KLK9Q2XQG4 91 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 OR2C3Q8N628 320 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 TMEM170AQ8WVE7 144 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 RBKSQ9H477 322 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 KLK9Q9UKQ9 250 aa12.15□□□□□ -0.46
VCX3B-204ENST00000453306 TRBV9A0A0B4J1U6 114 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 C13orf42A0A1B0GVH6 325 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 RAB9AP51151 201 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 ZBTB8BQ8NAP8 495 aaPredicted RBP12.14□□□□□ -0.47
VCX3B-204ENST00000453306 TMEM68Q96MH6 324 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 P2RX4Q99571 388 aa12.14□□□□□ -0.47
VCX3B-204ENST00000453306 SRSF8Q9BRL6 282 aaKnown RBP12.14□□□□□ -0.47
VCX3B-204ENST00000453306 NDUFB8O95169 186 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 BRI3O95415 125 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 TMEM50AO95807 157 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 ELANEP08246 267 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 PF4V1P10720 104 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 CXCL3P19876 107 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 CD33P20138 364 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 H2BFSP57053 126 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 SLC35B1P78383 322 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 IAH1Q2TAA2 248 aaPredicted RBP12.13□□□□□ -0.47
VCX3B-204ENST00000453306 PVRIGQ6DKI7 326 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 OR1S1Q8NH92 325 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 MAGT1Q9H0U3 335 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
VCX3B-204ENST00000453306 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
VCX3B-204ENST00000453306 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 GOSR2O14653 212 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 IFNA21P01568 189 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 MBPP02686 304 aaPredicted RBP12.12□□□□□ -0.47
VCX3B-204ENST00000453306 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
VCX3B-204ENST00000453306 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
VCX3B-204ENST00000453306 FCN2Q15485 313 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 OR11H7Q8NGC8 314 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 C2orf50Q96LR7 162 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 GON7Q9BXV9 100 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 C11orf1Q9H5F2 150 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 PLEKHA3Q9HB20 300 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
VCX3B-204ENST00000453306 TCRBV4S1A1TA0A5B7 111 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 OR2J3O76001 311 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 PAX9P55771 341 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
VCX3B-204ENST00000453306 Q6ZNX1 250 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
VCX3B-204ENST00000453306 F11RQ9Y624 299 aaKnown RBP12.11□□□□□ -0.47
VCX3B-204ENST00000453306 PIGBOS1A0A0B4J2F0 54 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 SSNA1O43805 119 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 TRGV3P03979 118 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 IAPPP10997 89 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 HOXA1P49639 335 aaPredicted RBP12.1□□□□□ -0.47
VCX3B-204ENST00000453306 RPL23AP62750 156 aaKnown RBP12.1□□□□□ -0.47
VCX3B-204ENST00000453306 RHOGP84095 191 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 MLANAQ16655 118 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 ZNF114Q8NC26 417 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 WFDC9Q8NEX5 89 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 OR4X2Q8NGF9 303 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 OR5B12Q96R08 314 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 RCL1Q9Y2P8 373 aaKnown RBP12.1□□□□□ -0.47
VCX3B-204ENST00000453306 S4R3C0 116 aa12.1□□□□□ -0.47
VCX3B-204ENST00000453306 FAM90A26D6RGX4 464 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 H3BUA1 57 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 IGHV3-11P01762 117 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 PF4P02776 101 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 NKX2-1P43699 371 aaPredicted RBP12.09□□□□□ -0.47
VCX3B-204ENST00000453306 TPPP2P59282 170 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 GSG1LQ6UXU4 331 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 HSD17B13Q7Z5P4 300 aaPredicted RBP12.09□□□□□ -0.47
VCX3B-204ENST00000453306 DTD1Q8TEA8 209 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 PDCD10Q9BUL8 212 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 MGAT4CQ9UBM8 478 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 FBXL7Q9UJT9 491 aa12.09□□□□□ -0.47
VCX3B-204ENST00000453306 IGHV3-21A0A0B4J1V1 117 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 MFSD2BA6NFX1 497 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms