RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 KMT2EQ8IZD2 1858 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 C21orf140B9A014 251 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 J3QR89 54 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 HNRNPA1P09651 372 aaKnown RBP eCLIP7.13□□□□□ -1.27
LSM5-208ENST00000450169 FABP2P12104 132 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 FBLP22087 321 aaKnown RBP7.13□□□□□ -1.27
LSM5-208ENST00000450169 FAM27BQ5VT28 67 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 SSX8Q7RTT4 187 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 BLNKQ8WV28 456 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 NANOS1Q8WY41 292 aaKnown RBP7.13□□□□□ -1.27
LSM5-208ENST00000450169 RAB37Q96AX2 223 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 CHCHD1Q96BP2 118 aaKnown RBP7.13□□□□□ -1.27
LSM5-208ENST00000450169 MGST2Q99735 147 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 MCRIP2Q9BUT9 160 aaKnown RBP7.13□□□□□ -1.27
LSM5-208ENST00000450169 KLRF1Q9NZS2 232 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 BRWD1Q9NSI6 2320 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 H0Y8G0 127 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 FOXH1O75593 365 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 CELA2BP08218 269 aaPredicted RBP7.12□□□□□ -1.27
LSM5-208ENST00000450169 SRSF2Q01130 221 aaKnown RBP7.12□□□□□ -1.27
LSM5-208ENST00000450169 ZNF816Q0VGE8 651 aaPredicted RBP7.12□□□□□ -1.27
LSM5-208ENST00000450169 EFNB3Q15768 340 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 SPATA31B1PQ5VZV4 182 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 TREML4Q6UXN2 200 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 Q6ZSR6 202 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 MRPL21Q7Z2W9 205 aaKnown RBP7.12□□□□□ -1.27
LSM5-208ENST00000450169 MBD6Q96DN6 1003 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 TRIB1Q96RU8 372 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 SSBP3Q9BWW4 388 aaPredicted RBP7.12□□□□□ -1.27
LSM5-208ENST00000450169 ZNF257Q9Y2Q1 563 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 RP1P56715 2156 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 A0A1W2PRE2 83 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 P04436 131 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 LIPFP07098 398 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 CCL7P80098 99 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 LYSMD4Q5XG99 296 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 IGF2-ASQ6U949 168 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 MTURNQ8N3F0 131 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 SPEM1Q8N4L4 309 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 FAM168AQ92567 244 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 C5orf30Q96GV9 206 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 RABAC1Q9UI14 185 aa7.12□□□□□ -1.27
LSM5-208ENST00000450169 OR5AL1P0C617 328 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 CAMPP49913 170 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 AESQ08117 197 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 LTC4SQ16873 150 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 CEACAM21Q3KPI0 293 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 LRRC29Q8WV35 223 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 SSMEM1Q8WWF3 244 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 LINC00470Q9BZP3 86 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 PRR33A8MZF0 331 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 IGFBP2P18065 325 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 CEACAM16Q2WEN9 425 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 LINC01545Q5VT33 79 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 H2BFWTQ7Z2G1 175 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 ZNF645Q8N7E2 425 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 IGF2BP2-AS1Q96M15 143 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 ZNF355PQ9NSJ1 428 aa7.11□□□□□ -1.27
LSM5-208ENST00000450169 EXPH5Q8NEV8 1989 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 TRAV24A0A0B4J272 114 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 EPOPA6NHQ4 379 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 NPIPA3F8WFD2 350 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 NEURL1O76050 574 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 TSPAN13O95857 204 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 OR9G9P0C7N8 305 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 FGF6P10767 208 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 COL8A2P25067 703 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 FOXA3P55318 350 aaPredicted RBP7.1□□□□□ -1.27
LSM5-208ENST00000450169 ZXDAP98168 799 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 ZNF542PQ5EBM4 170 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 PARM1Q6UWI2 310 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 ADAMTSL5Q6ZMM2 481 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 MKXQ8IYA7 352 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 NEU4Q8WWR8 484 aaPredicted RBP7.1□□□□□ -1.27
LSM5-208ENST00000450169 ZNF479Q96JC4 524 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 PSMG3-AS1Q96PY0 264 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 DUSP13Q9UII6 198 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 HSPB8Q9UJY1 196 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 F5P12259 2224 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 FBLL1A6NHQ2 334 aaKnown RBP7.1□□□□□ -1.27
LSM5-208ENST00000450169 PATE4P0C8F1 98 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 ZNF32P17041 273 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 FASLGP48023 281 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 RAC3P60763 192 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 PSG5Q15238 335 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 KRTAP27-1Q3LI81 207 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 ASPHD1Q5U4P2 390 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 LINC00596Q86U02 117 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 OR4A16Q8NH70 328 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 CDIP1Q9H305 208 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
LSM5-208ENST00000450169 SPANXB1Q9NS25 103 aaPredicted RBP7.1□□□□□ -1.27
LSM5-208ENST00000450169 MRPL16Q9NX20 251 aaKnown RBP7.1□□□□□ -1.27
LSM5-208ENST00000450169 LOC102723996A0A087X1L8 192 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms