RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 C15orf61A6NNL5 157 aa16.49■□□□□ 0.23
CPSF7-208ENST00000450000 M0QYG6 137 aa16.49■□□□□ 0.23
CPSF7-208ENST00000450000 RBMY1DP0C7P1 496 aaKnown RBP16.49■□□□□ 0.23
CPSF7-208ENST00000450000 LINC00322Q6ZN03 302 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-208ENST00000450000 SCARB1Q8WTV0 552 aa16.49■□□□□ 0.23
CPSF7-208ENST00000450000 C15orf40Q8WUR7 153 aa16.49■□□□□ 0.23
CPSF7-208ENST00000450000 TMEM190Q8WZ59 177 aa16.49■□□□□ 0.23
CPSF7-208ENST00000450000 ATP6V0BQ99437 205 aa16.49■□□□□ 0.23
CPSF7-208ENST00000450000 ZNF436Q9C0F3 470 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-208ENST00000450000 DAZ1Q9NQZ3 744 aaKnown RBP16.49■□□□□ 0.23
CPSF7-208ENST00000450000 NDUFA4O00483 81 aa16.48■□□□□ 0.23
CPSF7-208ENST00000450000 ZNF182P17025 639 aaPredicted RBP16.48■□□□□ 0.23
CPSF7-208ENST00000450000 ERHP84090 104 aaKnown RBP16.48■□□□□ 0.23
CPSF7-208ENST00000450000 OR2C3Q8N628 320 aa16.48■□□□□ 0.23
CPSF7-208ENST00000450000 MISP3Q96FF7 219 aa16.48■□□□□ 0.23
CPSF7-208ENST00000450000 GGTLC1Q9BX51 225 aa16.48■□□□□ 0.23
CPSF7-208ENST00000450000 EXTL2Q9UBQ6 330 aa16.48■□□□□ 0.23
CPSF7-208ENST00000450000 LOC102724200A0A096LPH7 203 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-208ENST00000450000 NUPL2O15504 423 aaKnown RBP16.47■□□□□ 0.23
CPSF7-208ENST00000450000 ATG12O94817 140 aa16.47■□□□□ 0.23
CPSF7-208ENST00000450000 C8orf88P0DMB2 117 aa16.47■□□□□ 0.23
CPSF7-208ENST00000450000 OR1P1Q8NH06 330 aa16.47■□□□□ 0.23
CPSF7-208ENST00000450000 MRGPRFQ96AM1 343 aa16.47■□□□□ 0.23
CPSF7-208ENST00000450000 C5orf66Q9H5L9 145 aa16.47■□□□□ 0.23
CPSF7-208ENST00000450000 TMEM14BQ9NUH8 114 aa16.47■□□□□ 0.23
CPSF7-208ENST00000450000 YIF1AO95070 293 aa16.46■□□□□ 0.23
CPSF7-208ENST00000450000 RELQ04864 619 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-208ENST00000450000 GPR107Q5VW38 600 aa16.46■□□□□ 0.23
CPSF7-208ENST00000450000 ZNF486Q96H40 463 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-208ENST00000450000 SPAG8Q99932 426 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-208ENST00000450000 PDCD10Q9BUL8 212 aa16.46■□□□□ 0.23
CPSF7-208ENST00000450000 AKR1C2P52895 323 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 MFAP2P55001 183 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 MFAP4P55083 255 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 ARRDC1Q8N5I2 433 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 SEC22AQ96IW7 307 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 COPZ2Q9P299 210 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 KLK11Q9UBX7 282 aa16.45■□□□□ 0.22
CPSF7-208ENST00000450000 DBX1A6NMT0 343 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 RGS5O15539 181 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 GABARAPO95166 117 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 TBPP20226 339 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 PIGPP57054 158 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 HSPE1P61604 102 aaKnown RBP16.44■□□□□ 0.22
CPSF7-208ENST00000450000 CCDC71LQ8N9Z2 235 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 OR52I2Q8NH67 350 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 RNASE11Q8TAA1 199 aaKnown RBP16.44■□□□□ 0.22
CPSF7-208ENST00000450000 ZFAND1Q8TCF1 268 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 PINX1Q96BK5 328 aaKnown RBP16.44■□□□□ 0.22
CPSF7-208ENST00000450000 CHRDL1Q9BU40 450 aa16.44■□□□□ 0.22
CPSF7-208ENST00000450000 IGHV3OR16-8A0A075B7F1 116 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 K7EIM0 57 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 ZNF207O43670 478 aaKnown RBP16.43■□□□□ 0.22
CPSF7-208ENST00000450000 CD3DP04234 171 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 SNCAP37840 140 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 PRCDQ00LT1 54 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 TRIM16LQ309B1 348 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 SCGB2B2Q4G0G5 96 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 GPR141Q7Z602 305 aa16.43■□□□□ 0.22
CPSF7-208ENST00000450000 NAA50Q9GZZ1 169 aaKnown RBP16.43■□□□□ 0.22
CPSF7-208ENST00000450000 LCE6AA0A183 80 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 OR4C46A6NHA9 309 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 K7EMT4 169 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 TSPAN4O14817 238 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 GNG7O60262 68 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 IFNA17P01571 189 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 PI3P19957 117 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 PPP5CP53041 499 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 APOC4P55056 127 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 RND3P61587 244 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 CTF1Q16619 201 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 SLC35G3Q8N808 338 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 TXN2Q99757 166 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 ENY2Q9NPA8 101 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 MTFP1Q9UDX5 166 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 UBQLN2Q9UHD9 624 aa16.42■□□□□ 0.22
CPSF7-208ENST00000450000 C3orf85A0A1B0GTC6 90 aa16.41■□□□□ 0.22
CPSF7-208ENST00000450000 C15orf62A8K5M9 175 aa16.41■□□□□ 0.22
CPSF7-208ENST00000450000 MT-CO2P00403 227 aa16.41■□□□□ 0.22
CPSF7-208ENST00000450000 TAS2R19P59542 299 aa16.41■□□□□ 0.22
CPSF7-208ENST00000450000 RRNAD1Q96FB5 475 aaKnown RBP16.41■□□□□ 0.22
CPSF7-208ENST00000450000 MRPS26Q9BYN8 205 aaKnown RBP16.41■□□□□ 0.22
CPSF7-208ENST00000450000 JTBO76095 146 aa16.4■□□□□ 0.22
CPSF7-208ENST00000450000 RAB3DO95716 219 aa16.4■□□□□ 0.22
CPSF7-208ENST00000450000 IGKV1-39P01597 117 aa16.4■□□□□ 0.22
CPSF7-208ENST00000450000 IGKV1D-39P04432 117 aa16.4■□□□□ 0.22
CPSF7-208ENST00000450000 BMI1P35226 326 aa16.4■□□□□ 0.22
CPSF7-208ENST00000450000 SUB1P53999 127 aaKnown RBP eCLIP16.4■□□□□ 0.22
CPSF7-208ENST00000450000 TMEM229BQ8NBD8 167 aa16.4■□□□□ 0.22
CPSF7-208ENST00000450000 C6orf62Q9GZU0 229 aaPredicted RBP16.4■□□□□ 0.22
CPSF7-208ENST00000450000 RYR3Q15413 4870 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 CTSGP08311 255 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 SMIM18P0DKX4 95 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 ADMP35318 185 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 NPBWR1P48145 328 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 SPINK9Q5DT21 86 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 ZNF114Q8NC26 417 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 TMEM116Q8NCL8 245 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 DUSP18Q8NEJ0 188 aa16.39■□□□□ 0.21
CPSF7-208ENST00000450000 TERB2Q8NHR7 220 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms