RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CXorf66Q5JRM2 361 aaPredicted RBP5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 THOC7Q6I9Y2 204 aaKnown RBP5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 TEX38Q6PEX7 206 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 HSD17B13Q7Z5P4 300 aaPredicted RBP5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 OR5M8Q8NGP6 311 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 OR1S1Q8NH92 325 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 PDCD10Q9BUL8 212 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 HSPB7Q9UBY9 170 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 A0A1W2PN81 502 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 FAM90A26D6RGX4 464 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 INS-IGF2F8WCM5 200 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 CCSO14618 274 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 NXPH3O95157 252 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 BRI3O95415 125 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 REG1AP05451 166 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 ELANEP08246 267 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 CD28P10747 220 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 CTRB1P17538 263 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 PSMB8P28062 276 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 CHRNA7P36544 502 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 RAB9AP51151 201 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 ERHP84090 104 aaKnown RBP5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 SRSF4Q08170 494 aaKnown RBP5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 IAH1Q2TAA2 248 aaPredicted RBP5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 TCTEX1D4Q5JR98 221 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 CTRB2Q6GPI1 263 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 TMEM65Q6PI78 240 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 GSG1LQ6UXU4 331 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 C12orf54Q6X4T0 127 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 OR2C3Q8N628 320 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 COMMD1Q8N668 190 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 RNF152Q8N8N0 203 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 ZBTB8BQ8NAP8 495 aaPredicted RBP5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 OR4D5Q8NGN0 318 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 FAM110DQ8TAY7 271 aaPredicted RBP5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 RNF141Q8WVD5 230 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 C2orf50Q96LR7 162 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 KLK15Q9H2R5 256 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 RBKSQ9H477 322 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 PLEKHA3Q9HB20 300 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 ENY2Q9NPA8 101 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 ZNF355PQ9NSJ1 428 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 GSKIPQ9P0R6 139 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 TENM1Q9UKZ4 2725 aa5.89□□□□□ -1.47
AC004540.1-206ENST00000448056 TCRBV4S1A1TA0A5B7 111 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 CEBPZOSA8MTT3 80 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 H3BUA1 57 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 GOSR2O14653 212 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 MED6O75586 246 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 SIX6O95475 246 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 PRH1P02810 166 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 PF4V1P10720 104 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 DEFA4P12838 97 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 NKX2-1P43699 371 aaPredicted RBP5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 H2BFSP57053 126 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 CD83Q01151 205 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 IL15RAQ13261 267 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 KIAA0141Q14154 515 aaPredicted RBP5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 KLK9Q2XQG4 91 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 Q6ZNX1 250 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 C19orf35Q6ZS72 473 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 LCNL1Q6ZST4 164 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 C3orf56Q8N813 242 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 C11orf44Q8N8P7 122 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 OR4X2Q8NGF9 303 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 ANAPC16Q96DE5 110 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 MS4A10Q96PG2 267 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 P2RX4Q99571 388 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 CITED1Q99966 193 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 ZNF747Q9BV97 191 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 MAGT1Q9H0U3 335 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 MED28Q9H204 178 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 HIPK2Q9H2X6 1198 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 HEYLQ9NQ87 328 aaPredicted RBP5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 KLK9Q9UKQ9 250 aa5.88□□□□□ -1.47
AC004540.1-206ENST00000448056 TRBV9A0A0B4J1U6 114 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 SYNGR2O43760 224 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 MBPP02686 304 aaPredicted RBP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 TRGV3P03979 118 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 HIST1H1BP16401 226 aaKnown RBP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 CXCL3P19876 107 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 SNCAP37840 140 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 HOXA1P49639 335 aaPredicted RBP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 SUB1P53999 127 aaKnown RBP eCLIP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 POLR2GP62487 172 aaKnown RBP eCLIP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 CYCSP99999 105 aaKnown RBP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 FCN2Q15485 313 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 HIST2H2BDQ6DRA6 164 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 SLC25A24Q6NUK1 477 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 ZNF491Q8N8L2 437 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 ZNF114Q8NC26 417 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 NECAP1Q8NC96 275 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 OR1L6Q8NGR2 347 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 OR1P1Q8NH06 330 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 MYOZ3Q8TDC0 251 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 DTD1Q8TEA8 209 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 CITED2Q99967 270 aaPredicted RBP5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 NMES1Q9C002 83 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 SLA2Q9H6Q3 261 aa5.87□□□□□ -1.47
AC004540.1-206ENST00000448056 ZFP57Q9NU63 452 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms