RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 TCF23Q7RTU1 214 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 PDPNQ86YL7 162 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 LINC00311Q8N616 119 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 ZNF383Q8NA42 475 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 OR1L8Q8NGR8 309 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 Q8WTZ3 238 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 TMEM186Q96B77 213 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 RPUSD4Q96CM3 377 aaKnown RBP3.3□□□□□ -1.88
PTPN12-208ENST00000447995 UHRF2Q96PU4 802 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 VKORC1Q9BQB6 163 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 PCGF1Q9BSM1 259 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 GGTLC1Q9BX51 225 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 HINT2Q9BX68 163 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 COMMD5Q9GZQ3 224 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 PARLQ9H300 379 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 SRD5A3Q9H8P0 318 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 TMEM167BQ9NRX6 74 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 TMEM106BQ9NUM4 274 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 DOK5Q9P104 306 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
PTPN12-208ENST00000447995 CACNA1HO95180 2353 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 ZNF318Q5VUA4 2279 aa3.3□□□□□ -1.88
PTPN12-208ENST00000447995 CFAP54Q96N23 3096 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 FAM186AA6NE01 2351 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 TRAV9-1A0A075B6T8 112 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 TGIF2-C20orf24A0A0A6YYL0 155 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 MDFIC2A0A1B0GVS7 189 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 A0A1W2PPE3 182 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 B9A039 149 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 PPP5D1E7EU14 171 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 INS-IGF2F8WCM5 200 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 YIF1AO95070 293 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 FSTL3O95633 263 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 IGHV3-7P01780 117 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 RBP4P02753 201 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 IL6RP08887 468 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CXCL1P09341 107 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CT45A6P0DMU7 189 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CT45A5P0DMU8 189 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CT45A7P0DMV0 189 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 GCHFRP30047 84 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 APOBEC3AP31941 199 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 MC5RP33032 325 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 GALR1P47211 349 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CDX1P47902 265 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 PRRX1P54821 245 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 LGALS4P56470 323 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 NDUFA6P56556 154 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 FAM3BP58499 235 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 LINC00205P59089 165 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 RPS16P62249 146 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 LCN2P80188 198 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 EFNB3Q15768 340 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 VMA21Q3ZAQ7 101 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 SPRNQ5BIV9 151 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 DNLZQ5SXM8 178 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 FAM201AQ5SY85 155 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 NCMAPQ5T1S8 102 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CST9LP1Q5W188 147 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 ZNF343Q6P1L6 599 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 SPNS3Q6ZMD2 512 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 PQLC2Q6ZP29 291 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 C16orf82Q7Z2V1 217 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 TMEM144Q7Z5S9 345 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 VKORC1L1Q8N0U8 176 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 ABHD12Q8N2K0 398 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 PNKDQ8N490 385 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 Q8NA96 180 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 OR4C13Q8NGP0 309 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 OR10X1Q8NGY0 326 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 OR9G1Q8NH87 305 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 TMEM167AQ8TBQ9 72 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 ZNF596Q8TC21 504 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CACNG8Q8WXS5 425 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 H1FXQ92522 213 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 NEUROG1Q92886 237 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 TNFRSF14Q92956 283 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 RNASE6Q93091 150 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 LEAP2Q969E1 77 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 FLYWCH2Q96CP2 140 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 HARBI1Q96MB7 349 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 IMMP2LQ96T52 175 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 MGST2Q99735 147 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 PYGO2Q9BRQ0 406 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 LRFN3Q9BTN0 628 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 MRPL32Q9BYC8 188 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 GAR1Q9NY12 217 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 TECRQ9NZ01 308 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 KAAG1Q9UBP8 84 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 SLC45A2Q9UMX9 530 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 FUT9Q9Y231 359 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 WASHC3Q9Y3C0 194 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 LY96Q9Y6Y9 160 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 URGCP-MRPS24S4R325 110 aa3.29□□□□□ -1.88
PTPN12-208ENST00000447995 CHD3Q12873 2000 aaKnown RBP3.29□□□□□ -1.88
PTPN12-208ENST00000447995 VPS13AQ96RL7 3174 aa3.28□□□□□ -1.88
PTPN12-208ENST00000447995 A0A087X0M5 115 aa3.28□□□□□ -1.88
PTPN12-208ENST00000447995 TRAV3A0A0B4J244 114 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms