RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 LOC105371242A0A075B767 164 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 IGKV1OR2-108A0A075B7D4 117 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 STPG3Q8N7X2 389 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 NIPSNAP3BQ9BS92 247 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 USP9XQ93008 2570 aaPredicted RBP14.04□□□□□ -0.16
SMC6-206ENST00000446852 GPR6P46095 362 aaPredicted RBP14.04□□□□□ -0.16
SMC6-206ENST00000446852 B2MP61769 119 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 ISOC2Q96AB3 205 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 RPEQ96AT9 228 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 AMMECR1Q9Y4X0 333 aaPredicted RBP14.04□□□□□ -0.16
SMC6-206ENST00000446852 WNK2Q9Y3S1 2297 aa14.04□□□□□ -0.16
SMC6-206ENST00000446852 A0A1W2PN81 502 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 A0A1W2PPI3 338 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 CHRNA7P36544 502 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 ERHP84090 104 aaKnown RBP14.03□□□□□ -0.16
SMC6-206ENST00000446852 GAMTQ14353 236 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 SLC35E3Q7Z769 313 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 SVEP1Q4LDE5 3571 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 CRYGBP07316 175 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 PSMB3P49720 205 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 KLRD1Q13241 179 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 TVP23CQ96ET8 276 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 MANBALQ9NQG1 85 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 KCNIP2Q9NS61 270 aa14.03□□□□□ -0.16
SMC6-206ENST00000446852 ZFYVE26Q68DK2 2539 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 A0A1W2PPV4 95 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 PAX6P26367 422 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 RPL29P47914 159 aaKnown RBP14.02□□□□□ -0.16
SMC6-206ENST00000446852 PRR20EP86478 221 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 PRR20CP86479 221 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 PRR20DP86480 221 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 PRR20BP86481 221 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 PRR20AP86496 221 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 CD69Q07108 199 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 PSG5Q15238 335 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 TMEM144Q7Z5S9 345 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 TEX45Q8NA69 505 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 OR11H6Q8NGC7 330 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 MED13LQ71F56 2210 aa14.02□□□□□ -0.16
SMC6-206ENST00000446852 DOPEY1Q5JWR5 2465 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 M0R1W7 72 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 RAB31Q13636 194 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 PRSS8Q16651 343 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 HCP5Q6MZN7 132 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 C15orf54Q8N8G6 183 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 ABHD5Q8WTS1 349 aa14.02□□□□□ -0.17
SMC6-206ENST00000446852 CACNA1BQ00975 2339 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 PAGE4O60829 102 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 LINC00869P0C866 280 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 ZFP36P26651 326 aaKnown RBP14.01□□□□□ -0.17
SMC6-206ENST00000446852 EFNA4P52798 201 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 TUBA4BQ9H853 241 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 SLC45A2Q9UMX9 530 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 SIGLEC9Q9Y336 463 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 VPS13CQ709C8 3753 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 UTP20O75691 2785 aaKnown RBP14.01□□□□□ -0.17
SMC6-206ENST00000446852 REG1AP05451 166 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 TMEM249Q2WGJ8 235 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 TPTE2P1Q5T6R2 138 aa14.01□□□□□ -0.17
SMC6-206ENST00000446852 SEPSECSQ9HD40 501 aaKnown RBP14.01□□□□□ -0.17
SMC6-206ENST00000446852 STAG3L2P0CL84 134 aa14□□□□□ -0.17
SMC6-206ENST00000446852 STAG3L3P0CL85 134 aa14□□□□□ -0.17
SMC6-206ENST00000446852 ARL14EPLP0DKL9 152 aa14□□□□□ -0.17
SMC6-206ENST00000446852 TAGLN2P37802 199 aaKnown RBP14□□□□□ -0.17
SMC6-206ENST00000446852 SPATA31B1PQ5VZV4 182 aa14□□□□□ -0.17
SMC6-206ENST00000446852 SLC16A13Q7RTY0 426 aa14□□□□□ -0.17
SMC6-206ENST00000446852 MMD2Q8IY49 270 aa14□□□□□ -0.17
SMC6-206ENST00000446852 IGFBPL1Q8WX77 278 aa14□□□□□ -0.17
SMC6-206ENST00000446852 HIST1H2BAQ96A08 127 aa14□□□□□ -0.17
SMC6-206ENST00000446852 MYO18BQ8IUG5 2567 aa14□□□□□ -0.17
SMC6-206ENST00000446852 IGLC7A0M8Q6 106 aa14□□□□□ -0.17
SMC6-206ENST00000446852 TIMM23O14925 209 aa14□□□□□ -0.17
SMC6-206ENST00000446852 PRTN3P24158 256 aa14□□□□□ -0.17
SMC6-206ENST00000446852 HTR1DP28221 377 aa14□□□□□ -0.17
SMC6-206ENST00000446852 OR4F5Q8NH21 305 aa14□□□□□ -0.17
SMC6-206ENST00000446852 OR2T6Q8NHC8 308 aa14□□□□□ -0.17
SMC6-206ENST00000446852 OR4F4Q96R69 305 aa14□□□□□ -0.17
SMC6-206ENST00000446852 FNDC4Q9H6D8 234 aaPredicted RBP14□□□□□ -0.17
SMC6-206ENST00000446852 ODF3BA8MYP8 253 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 CRYBA1P05813 215 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 TNXAQ16473 311 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 LHFPL4Q7Z7J7 247 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
SMC6-206ENST00000446852 ZNF727A8MUV8 499 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 IGHV2-5P01817 119 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 GATA2P23769 480 aaPredicted RBP13.99□□□□□ -0.17
SMC6-206ENST00000446852 OR10J1P30954 320 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 SPNS3Q6ZMD2 512 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 CACNG8Q8WXS5 425 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 DPM3Q9P2X0 92 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 HILPDAQ9Y5L2 63 aa13.99□□□□□ -0.17
SMC6-206ENST00000446852 CSMD1Q96PZ7 3565 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 TMEM250H0YL14 139 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 GPX4P36969 197 aaPredicted RBP13.98□□□□□ -0.17
SMC6-206ENST00000446852 PPP1R27Q86WC6 154 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 FBXL15Q9H469 300 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 A0A1W2PRD5 423 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 A0A1W2PRF3 423 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 A0A1W2PRM7 423 aa13.98□□□□□ -0.17
SMC6-206ENST00000446852 VENTXO95231 258 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms