RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 RAB24Q969Q5 203 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 SPOCK3Q9BQ16 436 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 VAX2Q9UIW0 290 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 AMMECR1Q9Y4X0 333 aaPredicted RBP13.92□□□□□ -0.18
CCDC197-202ENST00000444118 CYB5BO43169 146 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 YIF1AO95070 293 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 OPN1MWP04001 364 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 OPN1MW2P0DN77 364 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 OPN1MW3P0DN78 364 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 VMA21Q3ZAQ7 101 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 TEPPQ6URK8 271 aa13.92□□□□□ -0.18
CCDC197-202ENST00000444118 SSBP3Q9BWW4 388 aaPredicted RBP13.92□□□□□ -0.18
CCDC197-202ENST00000444118 IGHV1-3A0A0C4DH29 117 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 C7orf77A4D0Y5 90 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 CGB1A6NKQ9 187 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 LY6LH3BQJ8 138 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 M0R1W7 72 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 TAGLN2P37802 199 aaKnown RBP13.91□□□□□ -0.18
CCDC197-202ENST00000444118 CDC34P49427 236 aaPredicted RBP13.91□□□□□ -0.18
CCDC197-202ENST00000444118 RAB5BP61020 215 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 MRGPRG-AS1Q2M3A8 158 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 ZNF430Q9H8G1 570 aaPredicted RBP13.91□□□□□ -0.18
CCDC197-202ENST00000444118 DOPEY1Q5JWR5 2465 aa13.91□□□□□ -0.18
CCDC197-202ENST00000444118 A0A1W2PN81 502 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 UBE2CO00762 179 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 CHRNA7P36544 502 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 FAM90A2PQ658T7 463 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 RBMS3Q6XE24 437 aaKnown RBP13.9□□□□□ -0.18
CCDC197-202ENST00000444118 OR10W1Q8NGF6 305 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 SMCO4Q9NRQ5 59 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 ONECUT1Q9UBC0 465 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 CBY1Q9Y3M2 126 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 PXMP4Q9Y6I8 212 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 E7EUB6 86 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 M0R036 132 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 SLC25A17O43808 307 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 TEX45Q8NA69 505 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 OR11H6Q8NGC7 330 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 RITA1Q96K30 269 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
CCDC197-202ENST00000444118 AKAP6Q13023 2319 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 H3BQ15 152 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 CRYGBP07316 175 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 DEFA4P12838 97 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 COX7A1P24310 79 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 CDKN1AP38936 164 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 RPL29P47914 159 aaKnown RBP13.89□□□□□ -0.19
CCDC197-202ENST00000444118 GCSAMLQ5JQS6 135 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 TUBA4BQ9H853 241 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 UBTD1Q9HAC8 227 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 RPS10P5Q9NQ39 176 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 TPSG1Q9NRR2 321 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 INSIG2Q9Y5U4 225 aa13.89□□□□□ -0.19
CCDC197-202ENST00000444118 WNK2Q9Y3S1 2297 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 LOC105371242A0A075B767 164 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 SNRNP70P08621 437 aaKnown RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 GPR6P46095 362 aaPredicted RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 ERHP84090 104 aaKnown RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 MEF2BQ02080 365 aaPredicted RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PRB3Q04118 309 aaPredicted RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 MIC13Q5XKP0 118 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 TMEM144Q7Z5S9 345 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 RPEQ96AT9 228 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 C20orf24Q9BUV8 137 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PUS1Q9Y606 427 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 FLNCQ14315 2725 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 SPTAN1Q13813 2472 aaKnown RBP13.88□□□□□ -0.19
CCDC197-202ENST00000444118 A0A1W2PPI3 338 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 EFNA4P52798 201 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PRR20EP86478 221 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PRR20CP86479 221 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PRR20DP86480 221 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PRR20BP86481 221 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PRR20AP86496 221 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 WT1-ASQ06250 92 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 RAB31Q13636 194 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 C10orf55Q5SWW7 151 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 SLC35E3Q7Z769 313 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PNKDQ8N490 385 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 NIPSNAP3BQ9BS92 247 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 TMPRSS5Q9H3S3 457 aa13.88□□□□□ -0.19
CCDC197-202ENST00000444118 PSMB3P49720 205 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 CD81P60033 236 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 DEFA6Q01524 100 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 CD69Q07108 199 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 C1orf122Q6ZSJ8 110 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 STPG3Q8N7X2 389 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 CACNG8Q8WXS5 425 aa13.87□□□□□ -0.19
CCDC197-202ENST00000444118 C5orf52A6NGY3 159 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 ENSAO43768 121 aaKnown RBP13.86□□□□□ -0.19
CCDC197-202ENST00000444118 NDUFS7O75251 213 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 PRTN3P24158 256 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 AKR1C3P42330 323 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 LDLRAD2Q5SZI1 272 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 MMD2Q8IY49 270 aa13.86□□□□□ -0.19
CCDC197-202ENST00000444118 KIR3DL3Q8N743 410 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms