RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ABCC5O15440 1437 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 THSD7BQ9C0I4 1608 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 TRBV20OR9-2A0A075B6H5 130 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 TRAV9-1A0A075B6T8 112 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGHV3-35A0A0C4DH35 117 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM72A0PK05 275 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 DPRXA6NFQ7 191 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 GGT3PA6NGU5 568 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 LEUTXA8MZ59 168 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 GGTLC3B5MD39 225 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 TRGC2P03986 189 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 AKAIN1P0CW23 69 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 CA7P43166 264 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 GNG4P50150 75 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 NDUFA6P56556 154 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 LINC01547P58512 204 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 CXCL6P80162 114 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 RHOGP84095 191 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 VMA21Q3ZAQ7 101 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 HSD17B12Q53GQ0 312 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 COL5A1-AS1Q5SY13 56 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF497Q6ZNH5 498 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZDHHC22Q8N966 263 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 FAM57AQ8TBR7 257 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 ITLN1Q8WWA0 313 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 TOMM6Q96B49 74 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 C2orf50Q96LR7 162 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 AP1S3Q96PC3 154 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 SPIN2AQ99865 258 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 SPIN2BQ9BPZ2 258 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 SDF2L1Q9HCN8 221 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 METTL1Q9UBP6 276 aaKnown RBP2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 TP73-AS1Q9UF72 201 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 AK3Q9UIJ7 227 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 SCP2D1Q9UJQ7 156 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 COL5A2P05997 1499 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 KMT2EQ8IZD2 1858 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 DYSFO75923 2080 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 DUOX2Q9NRD8 1548 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 MYH15Q9Y2K3 1946 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 SCN10AQ9Y5Y9 1956 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 FOCADQ5VW36 1801 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGLV8-61A0A075B6I0 122 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGHV3OR16-10A0A075B7F0 116 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGHV1-45A0A0A0MS14 117 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 TRAV19A0A0A6YYK7 116 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGHV3-74A0A0B4J1X5 117 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGKV1D-43A0A0B4J1Z2 117 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 LINC00862A6NCI5 91 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ARRDC5A6NEK1 342 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 TLCD2A6NGC4 264 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 C9JQL5 133 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF670-ZNF695F2Z2N8 137 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF73O43830 326 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 LYZL6O75951 148 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 MPC2O95563 127 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 HLA-DPB1P04440 258 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 PAEPP09466 180 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 PGAM2P15259 253 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 BRS3P32247 399 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 RBMXP38159 391 aaKnown RBP2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF80P51504 273 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 PDGFRLQ15198 375 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 C1orf140Q5VVS0 124 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 C19orf48Q6RUI8 117 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 C2orf66Q6UXQ4 117 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 LCA10Q71F78 164 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 MOB1BQ7L9L4 216 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 RNF175Q8N4F7 328 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 C3orf22Q8N5N4 141 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 RPS4Y2Q8TD47 263 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 DCANP1Q8TF63 244 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 C7orf33Q8WU49 177 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 RAB2BQ8WUD1 216 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR4C12Q96R67 309 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 SDF2Q99470 211 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 CHCHD5Q9BSY4 110 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 GGTLC1Q9BX51 225 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 CBLN4Q9NTU7 201 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 SNX12Q9UMY4 172 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 RNF11Q9Y3C5 154 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 MRPS16Q9Y3D3 137 aaKnown RBP2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 SOX21Q9Y651 276 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 SIGLEC1Q9BZZ2 1709 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 MYO5CQ9NQX4 1742 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 IFT172Q9UG01 1749 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZMYM4Q5VZL5 1548 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ERCC6L2Q5T890 1561 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 KIF13BQ9NQT8 1826 aa2.61□□□□□ -1.99
HMGB1P12-201ENST00000438594 ADAMTS13Q76LX8 1427 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 KIAA1107Q9UPP5 1409 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 ATP10BO94823 1461 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 RALGAPBQ86X10 1494 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 LMTK2Q8IWU2 1503 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 KRTAP16-1A8MUX0 517 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGLL5B9A064 214 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 CCDC179H3BU77 68 aa2.6□□□□□ -1.99
HMGB1P12-201ENST00000438594 SNAPC5O75971 98 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms