RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 ZNF320A2RRD8 509 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 DBX1A6NMT0 343 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 ZNF701M0R085 212 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 UCP1P25874 307 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 GPR183P32249 361 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 ERHP84090 104 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 PLET1Q6UQ28 207 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 GTSCR1Q86UQ5 136 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 OR2C3Q8N628 320 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 OR1P1Q8NH06 330 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 RRNAD1Q96FB5 475 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 SCGB3A2Q96PL1 93 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 SOSTQ9BQB4 213 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 PDCD10Q9BUL8 212 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 PLEKHA3Q9HB20 300 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 PALMDQ9NP74 551 aa10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 TECRQ9NZ01 308 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-202ENST00000434101 A8MWP6 167 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 TGOLN2O43493 480 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 IGKV1-5P01602 117 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 FOLR2P14207 255 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 FAUP35544 74 aaKnown RBP10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 DHODHQ02127 395 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 SP6Q3SY56 376 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 SPSB3Q6PJ21 355 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 ZNF114Q8NC26 417 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 OR51S1Q8NGJ8 323 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 BSCL2Q96G97 398 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 ASCL2Q99929 193 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 NAA60Q9H7X0 242 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 GAR1Q9NY12 217 aaKnown RBP10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 SLC2A8Q9NY64 477 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 GPR132Q9UNW8 380 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 U3KQK5 164 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 DNAH9Q9NYC9 4486 aa10.02□□□□□ -0.81
TRAPPC4-202ENST00000434101 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 P0C879 139 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 MFAP2P55001 183 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 AP3S2P59780 193 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 CD300EQ496F6 205 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 PYDC2Q56P42 97 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 FAM219AQ8IW50 185 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 Q8N1Y9 231 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 SLC35G3Q8N808 338 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 SCARB1Q8WTV0 552 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 THAP7Q9BT49 309 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 RBM38Q9H0Z9 239 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 C5orf66Q9H5L9 145 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 ZC4H2Q9NQZ6 224 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 MCUBQ9NWR8 336 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
TRAPPC4-202ENST00000434101 OR2T8A6NH00 312 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 A8MZ25 164 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 K7EIM0 57 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 CDS2O95674 445 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 IFNA17P01571 189 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 CBLN1P23435 193 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 ELLP55199 621 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-202ENST00000434101 IZUMO4Q1ZYL8 232 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 DEFB114Q30KQ6 69 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 Q56UQ5 140 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 RBPMSQ93062 196 aaKnown RBP10□□□□□ -0.81
TRAPPC4-202ENST00000434101 MARC2Q969Z3 335 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 MISP3Q96FF7 219 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 ZNF436Q9C0F3 470 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-202ENST00000434101 ENY2Q9NPA8 101 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 COL7A1Q02388 2944 aa10□□□□□ -0.81
TRAPPC4-202ENST00000434101 IGHV3-21A0A0B4J1V1 117 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 A0A0B4J293 547 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 TMEM213A2RRL7 107 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 IZUMO1RA6ND01 250 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 INS-IGF2F8WCM5 200 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 ST8SIA3O43173 380 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 IGHV4-30-4P0DP06 118 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 SNCAP37840 140 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 SUB1P53999 127 aaKnown RBP eCLIP9.99□□□□□ -0.811e-9■■■■■ 65.6
TRAPPC4-202ENST00000434101 ZNF57Q68EA5 555 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 TOMM5Q8N4H5 51 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 UBAC2Q8NBM4 344 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 UXS1Q8NBZ7 420 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 GLYATL2Q8WU03 294 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 TXN2Q99757 166 aa9.99□□□□□ -0.81
TRAPPC4-202ENST00000434101 IGHV3-35A0A0C4DH35 117 aa9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 NDUFA4O00483 81 aa9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 FCGR2BP31994 310 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 HOXA1P49639 335 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 MFAP4P55083 255 aa9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 GUCA2BQ16661 112 aa9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 TM4SF20Q53R12 229 aa9.98□□□□□ -0.81
TRAPPC4-202ENST00000434101 SPINK9Q5DT21 86 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms