RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 GPR146Q96CH1 333 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 SHPKQ9UHJ6 478 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 S4R3C0 116 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 A0A0B4J293 547 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 TCRBP04435 133 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
TREX1-201ENST00000433541 SULT1A3P0DMM9 295 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 SULT1A4P0DMN0 295 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 IGLL1P15814 213 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
TREX1-201ENST00000433541 SNCAP37840 140 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 SLURP1P55000 103 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 ZNF429Q86V71 674 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 OR1S1Q8NH92 325 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 P2RX4Q99571 388 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 RANGRFQ9HD47 186 aaPredicted RBP12.01□□□□□ -0.49
TREX1-201ENST00000433541 NUDT15Q9NV35 164 aa12.01□□□□□ -0.49
TREX1-201ENST00000433541 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
TREX1-201ENST00000433541 CEBPZOSA8MTT3 80 aa12□□□□□ -0.49
TREX1-201ENST00000433541 BRI3O95415 125 aa12□□□□□ -0.49
TREX1-201ENST00000433541 HOXB5P09067 269 aa12□□□□□ -0.49
TREX1-201ENST00000433541 OR4E1P0C645 316 aa12□□□□□ -0.49
TREX1-201ENST00000433541 P0C879 139 aa12□□□□□ -0.49
TREX1-201ENST00000433541 DEFA1P59665 94 aa12□□□□□ -0.49
TREX1-201ENST00000433541 DEFA3P59666 94 aa12□□□□□ -0.49
TREX1-201ENST00000433541 ASAH1Q13510 395 aa12□□□□□ -0.49
TREX1-201ENST00000433541 ANKRD55Q3KP44 614 aa12□□□□□ -0.49
TREX1-201ENST00000433541 COQ8AQ8NI60 647 aa12□□□□□ -0.49
TREX1-201ENST00000433541 MISP3Q96FF7 219 aa12□□□□□ -0.49
TREX1-201ENST00000433541 RCC1LQ96I51 464 aaKnown RBP12□□□□□ -0.49
TREX1-201ENST00000433541 MCRIP2Q9BUT9 160 aaKnown RBP12□□□□□ -0.49
TREX1-201ENST00000433541 PEF1Q9UBV8 284 aaKnown RBP12□□□□□ -0.49
TREX1-201ENST00000433541 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
TREX1-201ENST00000433541 NOTCH3Q9UM47 2321 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 IGLV11-55A0A075B6I3 123 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 DUXBA0A1W2PPF3 345 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 C9orf170A2RU37 121 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 G3V4G9 280 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 NDUFB8O95169 186 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 DUS4LO95620 317 aaKnown RBP11.99□□□□□ -0.49
TREX1-201ENST00000433541 ZP3P21754 424 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 SMCO1Q147U7 214 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 RPEL1Q2QD12 228 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 ZNF343Q6P1L6 599 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 Q6ZRM9 215 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 LYG2Q86SG7 212 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 OR1L6Q8NGR2 347 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 FANCD2OSQ96PS1 177 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
TREX1-201ENST00000433541 TBC1D24Q9ULP9 559 aa11.99□□□□□ -0.49
TREX1-201ENST00000433541 OVOL1O14753 267 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 SUB1P53999 127 aaKnown RBP eCLIP11.98□□□□□ -0.49
TREX1-201ENST00000433541 SPCS3P61009 180 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 DHRS2Q13268 280 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 FHL3Q13643 280 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 CLEC19AQ6UXS0 136 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 OR2C3Q8N628 320 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 PINX1Q96BK5 328 aaKnown RBP11.98□□□□□ -0.49
TREX1-201ENST00000433541 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
TREX1-201ENST00000433541 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 SEC14L6B5MCN3 397 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 IFNA21P01568 189 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 TRBV12-3P01733 135 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 H2AFB2P0C5Z0 115 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 HOXD3P31249 432 aaPredicted RBP11.97□□□□□ -0.49
TREX1-201ENST00000433541 NMSQ5H8A3 153 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 UBAC2Q8NBM4 344 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 OR1P1Q8NH06 330 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 HIPK2Q9H2X6 1198 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 TMED3Q9Y3Q3 217 aa11.97□□□□□ -0.49
TREX1-201ENST00000433541 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 A0A1B0GU03 582 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 PPP5D1E7EU14 171 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 ARL3P36405 182 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 TATDN3Q17R31 274 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 LRTM2Q8N967 370 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 OR52B4Q8NGK2 314 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.49
TREX1-201ENST00000433541 ZC4H2Q9NQZ6 224 aa11.96□□□□□ -0.49
TREX1-201ENST00000433541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.95□□□□□ -0.5
TREX1-201ENST00000433541 SAP30O75446 220 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 GPR183P32249 361 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 TNFRSF9Q07011 255 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 Q56UQ5 140 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 GGNBP1Q5YKI7 109 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 OR52E5Q8NH55 327 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 FBN3Q75N90 2809 aa11.95□□□□□ -0.5
TREX1-201ENST00000433541 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms