RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 KCNK1O00180 336 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 ARPC5O15511 151 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 SULT1C4O75897 302 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 DCTN3O75935 186 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 CNIH1O95406 144 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 CPSF4O95639 269 aaKnown RBP3.14□□□□□ -1.91
USP54-206ENST00000433394 RBP1P09455 135 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 NBEAP1P0C6P0 100 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 UGT2B7P16662 529 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 S100GP29377 79 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 GRPRP30550 384 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 RPL5P46777 297 aaKnown RBP3.14□□□□□ -1.91
USP54-206ENST00000433394 GABRA4P48169 554 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 TMEM33P57088 247 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 DAD1P61803 113 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 TSNQ15631 228 aaKnown RBP3.14□□□□□ -1.91
USP54-206ENST00000433394 ARHGAP11BQ3KRB8 267 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 SYPL2Q5VXT5 272 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 DCUN1D2Q6PH85 259 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 OR11G2Q8NGC1 345 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 PPP1R2P1Q96PQ5 205 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 TSSK6Q9BXA6 273 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 YIPF3Q9GZM5 350 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 GTSF1LQ9H1H1 148 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 GSKIPQ9P0R6 139 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 LINC00527Q9UJ94 153 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 OR52A1Q9UKL2 312 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 SNX12Q9UMY4 172 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 HSPB11Q9Y547 144 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 CLUHO75153 1309 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 TSC2P49815 1807 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 PATJQ8NI35 1801 aa3.14□□□□□ -1.91
USP54-206ENST00000433394 TRANK1O15050 2925 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 MYO9BQ13459 2157 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR11H12B2RN74 326 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 FAM25AB3EWG3 89 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 FAM25CB3EWG5 89 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 FAM25GB3EWG6 89 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 TXNDC9O14530 226 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 COPEO14579 308 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 STK16O75716 305 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR2B3O76000 313 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 PROSCO94903 275 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR12D1P0DN82 309 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 RAB13P51153 203 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 APOFQ13790 326 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 CST6Q15828 149 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 LRRC26Q2I0M4 334 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 TBC1D28Q2M2D7 210 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 HLA-DRB5Q30154 266 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 TRMT12Q53H54 448 aaKnown RBP3.13□□□□□ -1.91
USP54-206ENST00000433394 SPIN4Q56A73 249 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 C10orf91Q5T1B1 145 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 EBLN2Q6P2I7 272 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 DHRS4L2Q6PKH6 230 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 CD200R1LQ6Q8B3 271 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 TMPPEQ6ZT21 453 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 DOLPP1Q86YN1 238 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR11H1Q8NG94 326 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR10X1Q8NGY0 326 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR11H2Q8NH07 326 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 C16orf78Q8WTQ4 265 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 TNFAIP8L1Q8WVP5 186 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 BTF3L4Q96K17 158 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 KCTD7Q96MP8 289 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 B9D2Q9BPU9 175 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 TLNRD1Q9H1K6 362 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 OR5V1Q9UGF6 321 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 SLC23A2Q9UGH3 650 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 ZNF391Q9UJN7 358 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 FBXO5Q9UKT4 447 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 ZNF443Q9Y2A4 671 aaPredicted RBP3.13□□□□□ -1.91
USP54-206ENST00000433394 PRELID3BQ9Y3B1 194 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 ASB4Q9Y574 426 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 HEY1Q9Y5J3 304 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 ALG5Q9Y673 324 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 PLXNB3Q9ULL4 1909 aa3.13□□□□□ -1.91
USP54-206ENST00000433394 ZNF638Q14966 1978 aaKnown RBP3.12□□□□□ -1.91
USP54-206ENST00000433394 COL4A4P53420 1690 aaPredicted RBP3.12□□□□□ -1.91
USP54-206ENST00000433394 FAM92AA1XBS5 289 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 C5orf67F2Z3F1 127 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 F5H768 121 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CXCR6O00574 342 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 TP53I11O14683 189 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 SLC25A20O43772 301 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 IFNA10P01566 189 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 OPN1SWP03999 348 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 OR10J4P0C629 311 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 C8orf88P0DMB2 117 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CGB3P0DN86 165 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CGB7P0DN87 165 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CTLA4P16410 223 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 SDC4P31431 198 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CA5AP35218 305 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CRYBA4P53673 196 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 CDC42P60953 191 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 RANP62826 216 aaKnown RBP3.12□□□□□ -1.91
USP54-206ENST00000433394 DHRS2Q13268 280 aa3.12□□□□□ -1.91
USP54-206ENST00000433394 TAF9Q16594 264 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms