RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 COX19Q49B96 90 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 C1orf159Q96HA4 380 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 NABP2Q9BQ15 211 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 TAX1BP3O14907 124 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 AREGP15514 252 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 CYB561P49447 251 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 EIF4EBP1Q13541 118 aaPredicted RBP9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 COQ2Q96H96 371 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 TMEM70Q9BUB7 260 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 TMEM140Q9NV12 185 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 KMT2EQ8IZD2 1858 aa9.53□□□□□ -0.88
HMGCS1-202ENST00000433297 GGTLC3B5MD39 225 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 H0YJW9 148 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 ISLRO14498 428 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 ERVK11-1P61568 191 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 LRRC10Q5BKY1 277 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 LINC00173Q6ZV60 143 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 OR52E5Q8NH55 327 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 LEAP2Q969E1 77 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 HES7Q9BYE0 225 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 FZR1Q9UM11 496 aa9.52□□□□□ -0.88
HMGCS1-202ENST00000433297 GAGE12BA1L429 117 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 GABRA6Q16445 453 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 S1PR3Q99500 378 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 WDR54Q9H977 334 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 NCKAP5O14513 1909 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 A0A087X0K7 114 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 HSBP1L1C9JCN9 74 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 SPINT2O43291 252 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 TOX4O94842 621 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 PPBPP02775 128 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 REG1AP05451 166 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 MLANAQ16655 118 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 NRN1LQ496H8 165 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 GDF5OSQ5U4N7 250 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 OR8B3Q8NGG8 313 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 Q8TCH9 128 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 CORO2AQ92828 525 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 SAP30LQ9HAJ7 183 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 HES4Q9HCC6 221 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 TMEM167BQ9NRX6 74 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
HMGCS1-202ENST00000433297 SMIM27A0A1W2PRY6 76 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 PROP1O75360 226 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 FAM214BQ7L5A3 538 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 MEGF9Q9H1U4 602 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 TRAV5A0A0B4J249 113 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 C2orf70A6NJV1 201 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 CORTO00230 105 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 SS18L1O75177 396 aaPredicted RBP9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 APOA2P02652 100 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 SLC25A34Q6PIV7 304 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 SSX8Q7RTT4 187 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 NUP35Q8NFH5 326 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 SLC25A40Q8TBP6 338 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 MRPL27Q9P0M9 148 aaKnown RBP9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 LOXL2Q9Y4K0 774 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 LSM4Q9Y4Z0 139 aaKnown RBP9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 TCTAP57738 103 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 PSG9Q00887 426 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 LYSMD4Q5XG99 296 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 SLC35E4Q6ICL7 350 aa9.51□□□□□ -0.89
HMGCS1-202ENST00000433297 AHCTF1Q8WYP5 2266 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 K7ERU9 68 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 SAP30O75446 220 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 IGLV2-8P01709 118 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 Q0VFX4 171 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 LINC00470Q9BZP3 86 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 HIGD1CA8MV81 97 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 MAGEA5P43359 124 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 ZNF137PP52743 207 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 ARG2P78540 354 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 TBR1Q16650 682 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 TBC1D28Q2M2D7 210 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 SMRP1Q8NCR6 262 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 DUSP13Q9UII6 198 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 UQCRFS1P47985 274 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 PPOXP50336 477 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 ZNF138P52744 262 aa9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 SNRNP40Q96DI7 357 aaKnown RBP9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 NAA38Q9BRA0 125 aaKnown RBP9.5□□□□□ -0.89
HMGCS1-202ENST00000433297 HCFC1P51610 2035 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 LEPROTL1O95214 131 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 ZNF503Q96F45 646 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 UBE2L3P68036 154 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 TCF24Q7RTU0 167 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 BOKQ9UMX3 212 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 PI4KAP42356 2102 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 PRR14LQ5THK1 2151 aa9.49□□□□□ -0.89
HMGCS1-202ENST00000433297 CSN3P07498 182 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms