RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 Q8N2B8 174 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 STPG2Q8N412 459 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR5T1Q8NG75 326 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 ST6GAL2Q96JF0 529 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZC4H2Q9NQZ6 224 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZNF355PQ9NSJ1 428 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 PSENENQ9NZ42 101 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR5AC2Q9NZP5 309 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 NPIPB5A8MRT5 1133 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 E5RGE8 158 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 CYB5BO43169 146 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 TSC22D2O75157 780 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 FBXO24O75426 580 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 TSPAN9O75954 239 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 NDUFA7O95182 113 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 PRH1P02810 166 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR8U8P0C7N1 319 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 NUP62P37198 522 aaPredicted RBP6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 SUB1P53999 127 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 TAS2R30P59541 319 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 RPP30P78346 268 aaKnown RBP6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 SLC35B1P78383 322 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZFP69Q49AA0 526 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 Q5BKY6 102 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 ASPHD1Q5U4P2 390 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR2C3Q8N628 320 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR4F5Q8NH21 305 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 FAM110DQ8TAY7 271 aaPredicted RBP6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 MISP3Q96FF7 219 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 SMIM8Q96KF7 97 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 TMEM68Q96MH6 324 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR4C12Q96R67 309 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 P2RX4Q99571 388 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 NEURL2Q9BR09 285 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 GON7Q9BXV9 100 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZNF580Q9UK33 172 aa6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 STRAPQ9Y3F4 350 aaKnown RBP6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 F11RQ9Y624 299 aaKnown RBP6.22□□□□□ -1.41
HMGA1P4-201ENST00000428643 PSMB11A5LHX3 300 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 C15orf62A8K5M9 175 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 INS-IGF2F8WCM5 200 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 G3V3Q6 166 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 H0YIZ8 118 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 ARPC5O15511 151 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 IFNA4P05014 189 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 METTL15P1P0C7V9 234 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 RNASE2P10153 161 aaKnown RBP6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 PF4V1P10720 104 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 CTRB1P17538 263 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 CRIP2P52943 208 aaPredicted RBP6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 RAB11AP62491 216 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 AKIRIN2Q53H80 203 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 CTRB2Q6GPI1 263 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR8G2PQ6IF36 304 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 ZNF329Q86UD4 541 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 NOXA1Q86UR1 476 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 STX12Q86Y82 276 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 TTC9CQ8N5M4 171 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 INO80EQ8NBZ0 244 aaPredicted RBP6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 ZNF114Q8NC26 417 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR1P1Q8NH06 330 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 PINX1Q96BK5 328 aaKnown RBP6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 RNF126Q9BV68 326 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 WNT10AQ9GZT5 417 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 LYRM2Q9NU23 88 aaPredicted RBP6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 SERTAD4Q9NUC0 356 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 U3KQ87 197 aa6.21□□□□□ -1.42
HMGA1P4-201ENST00000428643 IGSF23A1L1A6 192 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 FAM24AA6NFZ4 105 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 CORTO00230 105 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 SOX15O60248 233 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 CST7O76096 145 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 C1QBP02746 253 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 TRGV3P03979 118 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 CRYGCP07315 174 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLC25A4P12235 298 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 HIST1H1BP16401 226 aaKnown RBP6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 RPL12P30050 165 aaKnown RBP6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 OPRK1P41145 380 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 P2RY1P47900 373 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 PAX9P55771 341 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 ATP5IP56385 69 aaPredicted RBP6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 TPPP2P59282 170 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 RHOGP84095 191 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 DEFA5Q01523 94 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 EWSR1Q01844 656 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 CFHR3Q02985 330 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 BSXQ3C1V8 233 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 SLC25A24Q6NUK1 477 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM65Q6PI78 240 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 ETV3LQ6ZN32 361 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 CENPVQ7Z7K6 275 aaPredicted RBP6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 ZNF546Q86UE3 836 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 KLHDC1Q8N7A1 406 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM217Q8N7C4 229 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 OR1L6Q8NGR2 347 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 LINC01006Q8NI28 216 aa6.2□□□□□ -1.42
HMGA1P4-201ENST00000428643 TMEM170AQ8WVE7 144 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms