RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 NIPSNAP3BQ9BS92 247 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 HILPDAQ9Y5L2 63 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 IFNA1P01562 189 aa8.38□□□□□ -1.07
HDAC9-210ENST00000428307 RBP4P02753 201 aa8.38□□□□□ -1.07
HDAC9-210ENST00000428307 C2orf83Q53S99 150 aa8.38□□□□□ -1.07
HDAC9-210ENST00000428307 SLC35E3Q7Z769 313 aa8.38□□□□□ -1.07
HDAC9-210ENST00000428307 USP9XQ93008 2570 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-210ENST00000428307 MAP1AP78559 2803 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-210ENST00000428307 USP24Q9UPU5 2620 aa8.38□□□□□ -1.07
HDAC9-210ENST00000428307 SPG11Q96JI7 2443 aa8.38□□□□□ -1.07
HDAC9-210ENST00000428307 IGKV1OR2-108A0A075B7D4 117 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 A6NNC1 897 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 PAGE4O60829 102 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 ACTL6BO94805 426 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-210ENST00000428307 CD24P25063 80 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 ZFP36P26651 326 aaKnown RBP8.37□□□□□ -1.07
HDAC9-210ENST00000428307 CD81P60033 236 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 RAB31Q13636 194 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 GAMTQ14353 236 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 FAM90A2PQ658T7 463 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 STPG3Q8N7X2 389 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 OR2T6Q8NHC8 308 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 ABHD5Q8WTS1 349 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 SEPSECSQ9HD40 501 aaKnown RBP8.37□□□□□ -1.07
HDAC9-210ENST00000428307 WNK2Q9Y3S1 2297 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 COLCA2A8K830 154 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 ZNF727A8MUV8 499 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 HTR1DP28221 377 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 PSMB3P49720 205 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 GNB1P62873 340 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 MEF2BQ02080 365 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-210ENST00000428307 TNXAQ16473 311 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 MRGPRG-AS1Q2M3A8 158 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 BSXQ3C1V8 233 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 C17orf50Q8WW18 174 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 ACY3Q96HD9 319 aa8.37□□□□□ -1.07
HDAC9-210ENST00000428307 A0A1W2PN81 502 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 A0A1W2PPI3 338 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 SEC14L6B5MCN3 397 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 TIMM23O14925 209 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 CHRNA7P36544 502 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 TAGLN2P37802 199 aaKnown RBP8.36□□□□□ -1.07
HDAC9-210ENST00000428307 EFNA4P52798 201 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 UBE2G2P60604 165 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 LCN2P80188 198 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 PSG5Q15238 335 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 RHEBQ15382 184 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 HCP5Q6MZN7 132 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 C19orf35Q6ZS72 473 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 OR4F5Q8NH21 305 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 OR4F4Q96R69 305 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 FBXL15Q9H469 300 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 METTL1Q9UBP6 276 aaKnown RBP8.36□□□□□ -1.07
HDAC9-210ENST00000428307 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-210ENST00000428307 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 LY6LH3BQJ8 138 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 SOX15O60248 233 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 PRB1P04280 392 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 CD69Q07108 199 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 PRSS8Q16651 343 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 SPATA31B1PQ5VZV4 182 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 TMEM144Q7Z5S9 345 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 TVP23CQ96ET8 276 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 P2RX4Q99571 388 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 DPM3Q9P2X0 92 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 SIGLEC9Q9Y336 463 aa8.36□□□□□ -1.07
HDAC9-210ENST00000428307 FCN1O00602 326 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 CRYBA1P05813 215 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 ARL14EPLP0DKL9 152 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 OR10J1P30954 320 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 RPL29P47914 159 aaKnown RBP8.35□□□□□ -1.07
HDAC9-210ENST00000428307 ATP5IP56385 69 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-210ENST00000428307 KIAA0141Q14154 515 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PPP1R27Q86WC6 154 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 FAM24BQ8N5W8 94 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 TEX45Q8NA69 505 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
HDAC9-210ENST00000428307 BPESC1Q9GZL8 116 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 FNDC4Q9H6D8 234 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-210ENST00000428307 ABCA1O95477 2261 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 UTP20O75691 2785 aaKnown RBP8.35□□□□□ -1.07
HDAC9-210ENST00000428307 AREGP15514 252 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PRTN3P24158 256 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PRR20EP86478 221 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PRR20CP86479 221 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PRR20DP86480 221 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PRR20BP86481 221 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PRR20AP86496 221 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PMS2P11Q13670 270 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 PLGLAQ15195 96 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 SSX2Q16385 188 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 TPTE2P1Q5T6R2 138 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 CST9LP1Q5W188 147 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 MMD2Q8IY49 270 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 OR11H6Q8NGC7 330 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms