RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 ELK1P19419 428 aa12.59□□□□□ -0.39
CCDC78-203ENST00000423653 UCP3P55916 312 aa12.59□□□□□ -0.39
CCDC78-203ENST00000423653 H2BFWTQ7Z2G1 175 aa12.59□□□□□ -0.39
CCDC78-203ENST00000423653 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
CCDC78-203ENST00000423653 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
CCDC78-203ENST00000423653 C5orf66Q9H5L9 145 aa12.59□□□□□ -0.39
CCDC78-203ENST00000423653 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
CCDC78-203ENST00000423653 Q56UQ5 140 aa12.58□□□□□ -0.4
CCDC78-203ENST00000423653 RNASE10Q5GAN6 216 aaKnown RBP12.58□□□□□ -0.4
CCDC78-203ENST00000423653 UBAC2Q8NBM4 344 aa12.58□□□□□ -0.4
CCDC78-203ENST00000423653 OR1P1Q8NH06 330 aa12.58□□□□□ -0.4
CCDC78-203ENST00000423653 OR4A16Q8NH70 328 aa12.58□□□□□ -0.4
CCDC78-203ENST00000423653 GABARAPO95166 117 aa12.57□□□□□ -0.4
CCDC78-203ENST00000423653 TBPP20226 339 aa12.57□□□□□ -0.4
CCDC78-203ENST00000423653 MFAP2P55001 183 aa12.57□□□□□ -0.4
CCDC78-203ENST00000423653 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-203ENST00000423653 LAMTOR1Q6IAA8 161 aa12.57□□□□□ -0.4
CCDC78-203ENST00000423653 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
CCDC78-203ENST00000423653 ZNF486Q96H40 463 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-203ENST00000423653 SEC22AQ96IW7 307 aa12.57□□□□□ -0.4
CCDC78-203ENST00000423653 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
CCDC78-203ENST00000423653 IGHV3-21A0A0B4J1V1 117 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 K7EIM0 57 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 M0QYG6 137 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 PGAM2P15259 253 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 OR2C3Q8N628 320 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 C15orf40Q8WUR7 153 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 C20orf24Q9BUV8 137 aa12.56□□□□□ -0.4
CCDC78-203ENST00000423653 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 C15orf62A8K5M9 175 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 TSPAN4O14817 238 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 NUPL2O15504 423 aaKnown RBP12.55□□□□□ -0.4
CCDC78-203ENST00000423653 RND3P61587 244 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 PRCDQ00LT1 54 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 CHRDL1Q9BU40 450 aa12.55□□□□□ -0.4
CCDC78-203ENST00000423653 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 F8W735 103 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-203ENST00000423653 K7EMT4 169 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 ATG12O94817 140 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 ZNF182P17025 639 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-203ENST00000423653 AKR1C2P52895 323 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
CCDC78-203ENST00000423653 TXN2Q99757 166 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 EXTL2Q9UBQ6 330 aa12.54□□□□□ -0.4
CCDC78-203ENST00000423653 JTBO76095 146 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 FCGR2BP31994 310 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-203ENST00000423653 ADMP35318 185 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 APOC4P55056 127 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 MFAP4P55083 255 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 PIGPP57054 158 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
CCDC78-203ENST00000423653 ERHP84090 104 aaKnown RBP12.53□□□□□ -0.4
CCDC78-203ENST00000423653 CTF1Q16619 201 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 TENM2Q9NT68 2774 aa12.53□□□□□ -0.4
CCDC78-203ENST00000423653 CD3DP04234 171 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 SMIM18P0DKX4 95 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 PPP5CP53041 499 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 SLC35G3Q8N808 338 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 CCDC71LQ8N9Z2 235 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 OR52I2Q8NH67 350 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 ZFAND1Q8TCF1 268 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
CCDC78-203ENST00000423653 NAA50Q9GZZ1 169 aaKnown RBP12.52□□□□□ -0.41
CCDC78-203ENST00000423653 DYNC2H1Q8NCM8 4307 aaKnown RBP12.51□□□□□ -0.41
CCDC78-203ENST00000423653 IGHV3OR16-8A0A075B7F1 116 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 I3L2K1 104 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
CCDC78-203ENST00000423653 GNG7O60262 68 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 CTSGP08311 255 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 BMI1P35226 326 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 TAS2R19P59542 299 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 GPR107Q5VW38 600 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 PINX1Q96BK5 328 aaKnown RBP12.51□□□□□ -0.41
CCDC78-203ENST00000423653 COPZ2Q9P299 210 aa12.51□□□□□ -0.41
CCDC78-203ENST00000423653 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 B3GALNT1O75752 331 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 YIF1AO95070 293 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 MT-CO2P00403 227 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 PI3P19957 117 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 SNCAP37840 140 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 MRPS10P82664 201 aaKnown RBP12.5□□□□□ -0.41
CCDC78-203ENST00000423653 TRIM16LQ309B1 348 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
CCDC78-203ENST00000423653 OR10C1Q96KK4 312 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 TP53RKQ96S44 253 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 GINS3Q9BRX5 216 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 MRPS26Q9BYN8 205 aaKnown RBP12.5□□□□□ -0.41
CCDC78-203ENST00000423653 C6orf62Q9GZU0 229 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-203ENST00000423653 UBQLN2Q9UHD9 624 aa12.5□□□□□ -0.41
CCDC78-203ENST00000423653 SMPXQ9UHP9 88 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms