RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SLC25A24Q6NUK1 477 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 SGPP2Q8IWX5 399 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 TOMM5Q8N4H5 51 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 SLC2A8Q9NY64 477 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 KLK9Q9UKQ9 250 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 GPR132Q9UNW8 380 aa8.38□□□□□ -1.07
USP49-204ENST00000423567 PPP5D1E7EU14 171 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 IGHV3-23P01764 117 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 OR5AC1P0C628 307 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 UCP1P25874 307 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 INPP1P49441 399 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 HSPE1P61604 102 aaKnown RBP8.37□□□□□ -1.07
USP49-204ENST00000423567 WT1-ASQ06250 92 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 FAM106AQ4KMX7 169 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 VN1R17PQ8TDU5 208 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 DEDD2Q8WXF8 326 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
USP49-204ENST00000423567 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 C5orf66Q9H5L9 145 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 NAA60Q9H7X0 242 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 PLEKHA3Q9HB20 300 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 KCNIP3Q9Y2W7 256 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 F11RQ9Y624 299 aaKnown RBP8.37□□□□□ -1.07
USP49-204ENST00000423567 S4R3C0 116 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 V9GYH0 126 aa8.37□□□□□ -1.07
USP49-204ENST00000423567 MFSD2BA6NFX1 497 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 DBX1A6NMT0 343 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 OR2C1O95371 312 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 IFNA17P01571 189 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 CLEC3BP05452 202 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 SPNP16150 400 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 ERHP84090 104 aaKnown RBP8.36□□□□□ -1.07
USP49-204ENST00000423567 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 CD69Q07108 199 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 CCDC190Q86UF4 302 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 FAM219AQ8IW50 185 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 ZNF502Q8TBZ5 544 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 CCDC140Q96MF4 163 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 ENY2Q9NPA8 101 aa8.36□□□□□ -1.07
USP49-204ENST00000423567 LOC100996750A0A140TA64 210 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 CDS2O95674 445 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 IGKV1-5P01602 117 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
USP49-204ENST00000423567 ANXA3P12429 323 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 GP9P14770 177 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 GPR183P32249 361 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 SNCAP37840 140 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 ETV6P41212 452 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 KLF9Q13886 244 aaPredicted RBP8.35□□□□□ -1.07
USP49-204ENST00000423567 ZNF79Q15937 498 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 TRIQKQ629K1 86 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 ZNF57Q68EA5 555 aaPredicted RBP8.35□□□□□ -1.07
USP49-204ENST00000423567 LCN12Q6JVE5 192 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 GPHB5Q86YW7 130 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 OR2C3Q8N628 320 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 DYNLRB2Q8TF09 96 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 RBPMSQ93062 196 aaKnown RBP8.35□□□□□ -1.07
USP49-204ENST00000423567 TRIM63Q969Q1 353 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 KRTAP4-6Q9BYQ5 205 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 SIGLEC8Q9NYZ4 499 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
USP49-204ENST00000423567 PIGBOS1A0A0B4J2F0 54 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 ZNF320A2RRD8 509 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 LGALS9O00182 355 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 ST8SIA3O43173 380 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 TGOLN2O43493 480 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 CSN3P07498 182 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 AKR1C4P17516 323 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
USP49-204ENST00000423567 SUB1P53999 127 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP49-204ENST00000423567 SRPXP78539 464 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 Q56UQ5 140 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 TMEM268Q5VZI3 342 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 HAPLN4Q86UW8 402 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 UBAC2Q8NBM4 344 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 ZNF114Q8NC26 417 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 GLYATL2Q8WU03 294 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 MISP3Q96FF7 219 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 ATP6V0BQ99437 205 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 B9D2Q9BPU9 175 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 PALMDQ9NP74 551 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.34□□□□□ -1.07
USP49-204ENST00000423567 GAR1Q9NY12 217 aaKnown RBP8.34□□□□□ -1.07
USP49-204ENST00000423567 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 CACFD1Q9UGQ2 172 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 LSM4Q9Y4Z0 139 aaKnown RBP8.34□□□□□ -1.07
USP49-204ENST00000423567 DMRT1Q9Y5R6 373 aa8.34□□□□□ -1.07
USP49-204ENST00000423567 A0A0B4J293 547 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 P0C879 139 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 SPINK9Q5DT21 86 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 SPSB3Q6PJ21 355 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 IL34Q6ZMJ4 242 aa8.33□□□□□ -1.08
USP49-204ENST00000423567 TMED4Q7Z7H5 227 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms