RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CA2P00918 260 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 H2BFSP57053 126 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF324BQ6AW86 544 aaPredicted RBP8.04□□□□□ -1.12
CMSS1-201ENST00000421999 DHRS11Q6UWP2 260 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 DMRTC2Q8IXT2 367 aaPredicted RBP8.04□□□□□ -1.12
CMSS1-201ENST00000421999 TMSB15BA0A087X1C1 80 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 AP4M1O00189 453 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 IGKV3-20P01619 116 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 UCP1P25874 307 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 RELQ04864 619 aaPredicted RBP8.04□□□□□ -1.12
CMSS1-201ENST00000421999 CLEC19AQ6UXS0 136 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 RTBDNQ9BSG5 229 aaPredicted RBP8.04□□□□□ -1.12
CMSS1-201ENST00000421999 TMEM204Q9BSN7 226 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 TMEM56-RWDD3S4R434 201 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 RNASEK-C17orf49H0YIS7 233 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 TMEM155Q4W5P6 130 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 ASCL4Q6XD76 172 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 BIVMQ86UB2 503 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 VPS13AQ96RL7 3174 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 A0A0B4J293 547 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 IGHV3-66A0A0C4DH42 116 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF735P0CB33 412 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 HIST1H1BP16401 226 aaKnown RBP8.03□□□□□ -1.12
CMSS1-201ENST00000421999 CCKARP32238 428 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 FABP9Q0Z7S8 132 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 CR1LQ2VPA4 569 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 C3orf36Q3SXR2 165 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 Q6P435 159 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 GAFA1Q96PS6 74 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 WNT10AQ9GZT5 417 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 TUBA4BQ9H853 241 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 FOXA2Q9Y261 457 aaPredicted RBP8.03□□□□□ -1.12
CMSS1-201ENST00000421999 CTXND1A0A1B0GTU2 59 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 NPFFO15130 113 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 GATCO43716 136 aaKnown RBP8.03□□□□□ -1.12
CMSS1-201ENST00000421999 MPDU1O75352 247 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 GBGT1Q8N5D6 347 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 ELOVL1Q9BW60 279 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 UFC1Q9Y3C8 167 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 DEDDO75618 318 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 NAPSAO96009 420 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 Q5BKY6 102 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF429Q86V71 674 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 NRGNQ92686 78 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 TNFRSF14Q92956 283 aa8.03□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF292O60281 2723 aa8.02□□□□□ -1.12
CMSS1-201ENST00000421999 TMEM78Q5T7P6 136 aa8.02□□□□□ -1.12
CMSS1-201ENST00000421999 TAF15Q92804 592 aaKnown RBP eCLIP8.02□□□□□ -1.12
CMSS1-201ENST00000421999 LOC105371267A0A1B0GV96 52 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 S100A8P05109 93 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 RPL7P18124 248 aaKnown RBP8.02□□□□□ -1.13
CMSS1-201ENST00000421999 KHDC3LQ587J8 217 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 COMMD1Q8N668 190 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 OR10J6PQ8NGY7 276 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 ITLN2Q8WWU7 325 aaPredicted RBP8.02□□□□□ -1.13
CMSS1-201ENST00000421999 DDB2Q92466 427 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 TCRBV4S1A1TA0A5B7 111 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 MMP9P14780 707 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 NTF3P20783 257 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 SAA4P35542 130 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 RPL30P62888 115 aaKnown RBP8.02□□□□□ -1.13
CMSS1-201ENST00000421999 TMEM241Q24JQ0 296 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 COQ2Q96H96 371 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 DNAJC4Q9NNZ3 241 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 WDFY4Q6ZS81 3184 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 TNCP24821 2201 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 CXorf1O96002 111 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 DUTP33316 252 aaKnown RBP8.02□□□□□ -1.13
CMSS1-201ENST00000421999 C2orf68Q2NKX9 166 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 LGALSLQ3ZCW2 172 aaPredicted RBP8.02□□□□□ -1.13
CMSS1-201ENST00000421999 C10orf55Q5SWW7 151 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 GALNT14Q96FL9 552 aa8.02□□□□□ -1.13
CMSS1-201ENST00000421999 G3V3Q6 166 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 CAMPP49913 170 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 SERF2P84101 59 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 USF2Q15853 346 aaPredicted RBP8.01□□□□□ -1.13
CMSS1-201ENST00000421999 OR51G1Q8NGK1 321 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 TNFSF18Q9UNG2 199 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 PGPA6NDG6 321 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 RAMP3O60896 148 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 PITX3O75364 302 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 PRTN3P24158 256 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 DLX1P56177 255 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 RHOGP84095 191 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 ZNF329Q86UD4 541 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 C5orf17Q8NAS9 161 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 PHYHIPLQ96FC7 376 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 AURKAIP1Q9NWT8 199 aaPredicted RBP8.01□□□□□ -1.13
CMSS1-201ENST00000421999 MPTX1A8MV57 137 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 SHISA9B4DS77 424 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 TCL1AP56279 114 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 LDLRAD3Q86YD5 345 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 REG4Q9BYZ8 158 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 LYRM2Q9NU23 88 aaPredicted RBP8.01□□□□□ -1.13
CMSS1-201ENST00000421999 MOB4Q9Y3A3 225 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 LAMA1P25391 3075 aa8.01□□□□□ -1.13
CMSS1-201ENST00000421999 RBFOX3A6NFN3 312 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms