RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 HRH1P35367 487 aa14.05□□□□□ -0.16
VARS2-202ENST00000421263 LPCAT3Q6P1A2 487 aa14.05□□□□□ -0.16
VARS2-202ENST00000421263 TMEM56Q96MV1 263 aa14.05□□□□□ -0.16
VARS2-202ENST00000421263 HINT2Q9BX68 163 aa14.05□□□□□ -0.16
VARS2-202ENST00000421263 A0A087WXM4 84 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 IGHV3-21A0A0B4J1V1 117 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 EIF4EP06730 217 aaKnown RBP14.04□□□□□ -0.16
VARS2-202ENST00000421263 CTSGP08311 255 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 HLA-DMAP28067 261 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 LAMTOR1Q6IAA8 161 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 Q6ZWC4 215 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 OR1P1Q8NH06 330 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 TSC22D3Q99576 134 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 TP53TG1Q9Y2A0 90 aa14.04□□□□□ -0.16
VARS2-202ENST00000421263 C15orf61A6NNL5 157 aa14.03□□□□□ -0.16
VARS2-202ENST00000421263 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
VARS2-202ENST00000421263 UCP3P55916 312 aa14.03□□□□□ -0.16
VARS2-202ENST00000421263 TSPAN14Q8NG11 270 aa14.03□□□□□ -0.16
VARS2-202ENST00000421263 SEC22AQ96IW7 307 aa14.03□□□□□ -0.16
VARS2-202ENST00000421263 SCPEP1Q9HB40 452 aa14.03□□□□□ -0.16
VARS2-202ENST00000421263 IGKV1-39P01597 117 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 APOA1P02647 267 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 IGKV1D-39P04432 117 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 FCGR2BP31994 310 aaPredicted RBP14.02□□□□□ -0.17
VARS2-202ENST00000421263 ODF3L2Q3SX64 289 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 PHLDA2Q53GA4 152 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 TBC1D26Q86UD7 250 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 COMMD3Q9UBI1 195 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 UBQLN2Q9UHD9 624 aa14.02□□□□□ -0.17
VARS2-202ENST00000421263 KIR2DL5BA0A0G2JN68 375 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 KIR2DL5BA0A0G2JPC4 375 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 I3L2K1 104 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 UBE2CO00762 179 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 APOC4P55056 127 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 TSPAN5P62079 268 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 TNFRSF9Q07011 255 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 KIR2DL5AQ8N109 375 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 KIR2DL5BQ8NHK3 375 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 C20orf24Q9BUV8 137 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 VCX3AQ9NNX9 186 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 SMPXQ9UHP9 88 aa14.01□□□□□ -0.17
VARS2-202ENST00000421263 SMIM31A0A1B0GVY4 71 aa14□□□□□ -0.17
VARS2-202ENST00000421263 SPRY2O43597 315 aa14□□□□□ -0.17
VARS2-202ENST00000421263 S100GP29377 79 aa14□□□□□ -0.17
VARS2-202ENST00000421263 BMI1P35226 326 aa14□□□□□ -0.17
VARS2-202ENST00000421263 Q56UQ5 140 aa14□□□□□ -0.17
VARS2-202ENST00000421263 UBAC2Q8NBM4 344 aa14□□□□□ -0.17
VARS2-202ENST00000421263 ZNF114Q8NC26 417 aa14□□□□□ -0.17
VARS2-202ENST00000421263 OR10C1Q96KK4 312 aa14□□□□□ -0.17
VARS2-202ENST00000421263 TXN2Q99757 166 aa14□□□□□ -0.17
VARS2-202ENST00000421263 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 OR4C46A6NHA9 309 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 ZNF207O43670 478 aaKnown RBP13.99□□□□□ -0.17
VARS2-202ENST00000421263 TNFAIP8O95379 198 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 CTSDP07339 412 aaPredicted RBP13.99□□□□□ -0.17
VARS2-202ENST00000421263 RCVRNP35243 200 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 HSPE1P61604 102 aaKnown RBP13.99□□□□□ -0.17
VARS2-202ENST00000421263 NCS1P62166 190 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 EWSR1Q01844 656 aaKnown RBP eCLIP13.99□□□□□ -0.17
VARS2-202ENST00000421263 H2BFWTQ7Z2G1 175 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 FUNDC2Q9BWH2 189 aa13.99□□□□□ -0.17
VARS2-202ENST00000421263 A0A0J9YWU9 116 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 CHEK1O14757 476 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 ATF4P18848 351 aaPredicted RBP13.98□□□□□ -0.17
VARS2-202ENST00000421263 ELK1P19419 428 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 MFAP4P55083 255 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 PRCDQ00LT1 54 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 RELQ04864 619 aaPredicted RBP13.98□□□□□ -0.17
VARS2-202ENST00000421263 LYG2Q86SG7 212 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 SNX29P2Q8IUI4 249 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 OR4A16Q8NH70 328 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 RNF183Q96D59 192 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 GALNT14Q96FL9 552 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 RNF2Q99496 336 aa13.98□□□□□ -0.17
VARS2-202ENST00000421263 NXF2Q9GZY0 626 aaKnown RBP13.98□□□□□ -0.17
VARS2-202ENST00000421263 IGHV7-4-1A0A0J9YVY3 117 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 NUPL2O15504 423 aaKnown RBP13.97□□□□□ -0.17
VARS2-202ENST00000421263 RND3P61587 244 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 VBP1P61758 197 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 DEFB135Q30KP9 77 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 FAM90A2PQ658T7 463 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 RHPN1-AS1Q9BWJ2 59 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 MAP6D1Q9H9H5 199 aa13.97□□□□□ -0.17
VARS2-202ENST00000421263 HPGDSO60760 199 aa13.96□□□□□ -0.17
VARS2-202ENST00000421263 MT-CO2P00403 227 aa13.96□□□□□ -0.17
VARS2-202ENST00000421263 STPG3Q8N7X2 389 aa13.96□□□□□ -0.17
VARS2-202ENST00000421263 TMEM116Q8NCL8 245 aa13.96□□□□□ -0.17
VARS2-202ENST00000421263 MRGPRFQ96AM1 343 aa13.96□□□□□ -0.17
VARS2-202ENST00000421263 MISP3Q96FF7 219 aa13.96□□□□□ -0.17
VARS2-202ENST00000421263 TRAV14DV4A0A0A6YYC5 116 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 INS-IGF2F8WCM5 200 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 P0C879 139 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 CMC4P56277 68 aaPredicted RBP13.95□□□□□ -0.18
VARS2-202ENST00000421263 ERHP84090 104 aaKnown RBP13.95□□□□□ -0.18
VARS2-202ENST00000421263 PVRIGQ6DKI7 326 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 LHFPL1Q86WI0 220 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 LINC00476Q8WZB0 136 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 ZNF486Q96H40 463 aaPredicted RBP13.95□□□□□ -0.18
VARS2-202ENST00000421263 KLK11Q9UBX7 282 aa13.95□□□□□ -0.18
VARS2-202ENST00000421263 M0QYG6 137 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms