RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 C15orf61A6NNL5 157 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 FAM25AB3EWG3 89 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 FAM25CB3EWG5 89 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 FAM25GB3EWG6 89 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 NDUFA4O00483 81 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 ELK1P19419 428 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 C15orf40Q8WUR7 153 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 TMEM190Q8WZ59 177 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 WFDC10AQ9H1F0 79 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 C5orf66Q9H5L9 145 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 TMEM14BQ9NUH8 114 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 STARD9Q9P2P6 4700 aa16.01■□□□□ 0.15
PTPN4-202ENST00000420482 HPGDSO60760 199 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 Q56UQ5 140 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 UBAC2Q8NBM4 344 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 OR1P1Q8NH06 330 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 SCARB1Q8WTV0 552 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 SPAG8Q99932 426 aaPredicted RBP16■□□□□ 0.15
PTPN4-202ENST00000420482 GGTLC1Q9BX51 225 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 RETNQ9HD89 108 aa16■□□□□ 0.15
PTPN4-202ENST00000420482 EPPK1P58107 5090 aaKnown RBP15.99■□□□□ 0.15
PTPN4-202ENST00000420482 LOC102724200A0A096LPH7 203 aaPredicted RBP15.99■□□□□ 0.15
PTPN4-202ENST00000420482 OR2C3Q8N628 320 aa15.99■□□□□ 0.15
PTPN4-202ENST00000420482 ZNF486Q96H40 463 aaPredicted RBP15.99■□□□□ 0.15
PTPN4-202ENST00000420482 FAM110AQ9BQ89 295 aa15.99■□□□□ 0.15
PTPN4-202ENST00000420482 SELENOKQ9Y6D0 94 aa15.99■□□□□ 0.15
PTPN4-202ENST00000420482 ATG12O94817 140 aa15.98■□□□□ 0.15
PTPN4-202ENST00000420482 RELQ04864 619 aaPredicted RBP15.98■□□□□ 0.15
PTPN4-202ENST00000420482 RNASE10Q5GAN6 216 aaKnown RBP15.98■□□□□ 0.15
PTPN4-202ENST00000420482 C20orf24Q9BUV8 137 aa15.98■□□□□ 0.15
PTPN4-202ENST00000420482 K7EMT4 169 aa15.97■□□□□ 0.15
PTPN4-202ENST00000420482 NUPL2O15504 423 aaKnown RBP15.97■□□□□ 0.15
PTPN4-202ENST00000420482 PGAM2P15259 253 aa15.97■□□□□ 0.15
PTPN4-202ENST00000420482 TBPP20226 339 aa15.97■□□□□ 0.15
PTPN4-202ENST00000420482 ARRDC1Q8N5I2 433 aa15.97■□□□□ 0.15
PTPN4-202ENST00000420482 SEC22AQ96IW7 307 aa15.97■□□□□ 0.15
PTPN4-202ENST00000420482 IGHV3-21A0A0B4J1V1 117 aa15.96■□□□□ 0.15
PTPN4-202ENST00000420482 TSPAN4O14817 238 aa15.96■□□□□ 0.15
PTPN4-202ENST00000420482 ZNF182P17025 639 aaPredicted RBP15.96■□□□□ 0.15
PTPN4-202ENST00000420482 ERHP84090 104 aaKnown RBP15.96■□□□□ 0.15
PTPN4-202ENST00000420482 TXN2Q99757 166 aa15.96■□□□□ 0.15
PTPN4-202ENST00000420482 OR4C46A6NHA9 309 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 C15orf62A8K5M9 175 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 K7EIM0 57 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 M0QYG6 137 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 MFAP2P55001 183 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 APOC4P55056 127 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 MFAP4P55083 255 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 HSPE1P61604 102 aaKnown RBP15.95■□□□□ 0.14
PTPN4-202ENST00000420482 PRCDQ00LT1 54 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 MRGPRFQ96AM1 343 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 MISP3Q96FF7 219 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 EXTL2Q9UBQ6 330 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 BIRC6Q9NR09 4857 aa15.95■□□□□ 0.14
PTPN4-202ENST00000420482 JTBO76095 146 aa15.94■□□□□ 0.14
PTPN4-202ENST00000420482 GABARAPO95166 117 aa15.94■□□□□ 0.14
PTPN4-202ENST00000420482 RND3P61587 244 aa15.94■□□□□ 0.14
PTPN4-202ENST00000420482 ZNF114Q8NC26 417 aa15.94■□□□□ 0.14
PTPN4-202ENST00000420482 CHRDL1Q9BU40 450 aa15.94■□□□□ 0.14
PTPN4-202ENST00000420482 PDCD10Q9BUL8 212 aa15.94■□□□□ 0.14
PTPN4-202ENST00000420482 DBX1A6NMT0 343 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 SNCAP37840 140 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 AKR1C2P52895 323 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 PIGPP57054 158 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 RNASE12Q5GAN4 147 aaKnown RBP15.93■□□□□ 0.14
PTPN4-202ENST00000420482 CCDC71LQ8N9Z2 235 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 ZFAND1Q8TCF1 268 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 KLK11Q9UBX7 282 aa15.93■□□□□ 0.14
PTPN4-202ENST00000420482 GNG7O60262 68 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 YIF1AO95070 293 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 CTSGP08311 255 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 FCGR2BP31994 310 aaPredicted RBP15.92■□□□□ 0.14
PTPN4-202ENST00000420482 BMI1P35226 326 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 ADMP35318 185 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 CTF1Q16619 201 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 COPZ2Q9P299 210 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 MTFP1Q9UDX5 166 aa15.92■□□□□ 0.14
PTPN4-202ENST00000420482 F8W735 103 aaPredicted RBP15.91■□□□□ 0.14
PTPN4-202ENST00000420482 B3GALNT1O75752 331 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 IGKV1-39P01597 117 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 CD3DP04234 171 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 IGKV1D-39P04432 117 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 SUB1P53999 127 aaKnown RBP eCLIP15.91■□□□□ 0.14
PTPN4-202ENST00000420482 CMC4P56277 68 aaPredicted RBP15.91■□□□□ 0.14
PTPN4-202ENST00000420482 TAS2R19P59542 299 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 GPR107Q5VW38 600 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 LHFPL1Q86WI0 220 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 SLC35G3Q8N808 338 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 OR52I2Q8NH67 350 aa15.91■□□□□ 0.14
PTPN4-202ENST00000420482 PINX1Q96BK5 328 aaKnown RBP15.91■□□□□ 0.14
PTPN4-202ENST00000420482 C6orf62Q9GZU0 229 aaPredicted RBP15.91■□□□□ 0.14
PTPN4-202ENST00000420482 C3orf85A0A1B0GTC6 90 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 I3L2K1 104 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 UBE2CO00762 179 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 RGS5O15539 181 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 MT-CO2P00403 227 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 IFNA17P01571 189 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 TRIM16LQ309B1 348 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 TERB2Q8NHR7 220 aa15.9■□□□□ 0.14
PTPN4-202ENST00000420482 GINS3Q9BRX5 216 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms