RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ABCA12Q86UK0 2595 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 APCP25054 2843 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 SVEP1Q4LDE5 3571 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 NBPF19A0A087WUL8 3843 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 RBFOX3A6NFN3 312 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 LRRC75A-AS1Q8N1F1 130 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 SFT2D1Q8WV19 159 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 SLC35B3Q9H1N7 401 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 TNCP24821 2201 aa16.79■□□□□ 0.28
GPC1-202ENST00000420138 POLQO75417 2590 aa16.78■□□□□ 0.28
GPC1-202ENST00000420138 ABCA2Q9BZC7 2435 aa16.78■□□□□ 0.28
GPC1-202ENST00000420138 TRAV1-1A0A0B4J248 108 aa16.78■□□□□ 0.28
GPC1-202ENST00000420138 OOSP1A8MZH6 123 aa16.78■□□□□ 0.28
GPC1-202ENST00000420138 SCAF4O95104 1147 aaKnown RBP16.78■□□□□ 0.28
GPC1-202ENST00000420138 CENPVQ7Z7K6 275 aaPredicted RBP16.78■□□□□ 0.28
GPC1-202ENST00000420138 TIMM9Q9Y5J7 89 aa16.78■□□□□ 0.28
GPC1-202ENST00000420138 A0A096LNT2 108 aa16.77■□□□□ 0.28
GPC1-202ENST00000420138 SLC25A16P16260 332 aa16.77■□□□□ 0.28
GPC1-202ENST00000420138 ATF4P18848 351 aaPredicted RBP16.77■□□□□ 0.28
GPC1-202ENST00000420138 SSBP2P81877 361 aaPredicted RBP16.77■□□□□ 0.28
GPC1-202ENST00000420138 RPRMQ9NS64 109 aa16.77■□□□□ 0.28
GPC1-202ENST00000420138 TBL2Q9Y4P3 447 aaKnown RBP16.77■□□□□ 0.28
GPC1-202ENST00000420138 IGKV1D-33P01593 117 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 IGKV1-33P01594 117 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 RNASE2P10153 161 aaKnown RBP16.77■□□□□ 0.27
GPC1-202ENST00000420138 CD24P25063 80 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 RAB11AP62491 216 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 WT1-ASQ06250 92 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 TMEM88Q6PEY1 159 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 RARRES2Q99969 163 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 GGACTQ9BVM4 153 aa16.77■□□□□ 0.27
GPC1-202ENST00000420138 METTL1Q9UBP6 276 aaKnown RBP16.77■□□□□ 0.27
GPC1-202ENST00000420138 CENPVL3A0A0U1RRI6 287 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 LGALS4P56470 323 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 C2orf83Q53S99 150 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 PPP1R27Q86WC6 154 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 MMD2Q8IY49 270 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 MBD6Q96DN6 1003 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 EAF1Q96JC9 268 aaPredicted RBP16.76■□□□□ 0.27
GPC1-202ENST00000420138 FBXL15Q9H469 300 aa16.76■□□□□ 0.27
GPC1-202ENST00000420138 IFNA4P05014 189 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 DLK1P80370 383 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 CCDC144NLQ6NUI1 221 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 C1orf159Q96HA4 380 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 WDR83OSQ9Y284 106 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 MOSP00540 346 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 SAA4P35542 130 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 EBI3Q14213 229 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 TMEM41BQ5BJD5 291 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 Q5PR19 223 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 CBLN2Q8IUK8 224 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 NPBQ8NG41 125 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 MBD3L1Q8WWY6 194 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 MALSU1Q96EH3 234 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 VSIRQ9H7M9 311 aa16.75■□□□□ 0.27
GPC1-202ENST00000420138 WNK2Q9Y3S1 2297 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 A0A1W2PN81 502 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 FCN1O00602 326 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 NDUFA3O95167 84 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 SNRNP70P08621 437 aaKnown RBP16.74■□□□□ 0.27
GPC1-202ENST00000420138 FGF7P21781 194 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 CHRNA7P36544 502 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 ATP5IP56385 69 aaPredicted RBP16.74■□□□□ 0.27
GPC1-202ENST00000420138 HNF4GQ14541 408 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 ARSJQ5FYB0 599 aaPredicted RBP16.74■□□□□ 0.27
GPC1-202ENST00000420138 Q8N6K4 173 aa16.74■□□□□ 0.27
GPC1-202ENST00000420138 IGLC7A0M8Q6 106 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 MSMBP08118 114 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 MAS1LP35410 378 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 COMPP49747 757 aaPredicted RBP16.73■□□□□ 0.27
GPC1-202ENST00000420138 HAGHQ16775 308 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 ZNF506Q5JVG8 444 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 TREML4Q6UXN2 200 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 NPCDR1Q9BY65 106 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 OR13C7P0DN81 318 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 MMDQ15546 238 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 TNXAQ16473 311 aa16.73■□□□□ 0.27
GPC1-202ENST00000420138 NPFFO15130 113 aa16.72■□□□□ 0.27
GPC1-202ENST00000420138 NBR2O15453 112 aa16.72■□□□□ 0.27
GPC1-202ENST00000420138 RPL27AP46776 148 aaKnown RBP16.72■□□□□ 0.27
GPC1-202ENST00000420138 ERHP84090 104 aaKnown RBP16.72■□□□□ 0.27
GPC1-202ENST00000420138 OR2T10Q8NGZ9 312 aa16.72■□□□□ 0.27
GPC1-202ENST00000420138 RCC1LQ96I51 464 aaKnown RBP16.72■□□□□ 0.27
GPC1-202ENST00000420138 FASNP49327 2511 aaKnown RBP16.72■□□□□ 0.27
GPC1-202ENST00000420138 ELLP55199 621 aaPredicted RBP16.71■□□□□ 0.27
GPC1-202ENST00000420138 ICAM4Q14773 271 aa16.71■□□□□ 0.27
GPC1-202ENST00000420138 ZNF726P1Q15940 193 aa16.71■□□□□ 0.27
GPC1-202ENST00000420138 KHDC3LQ587J8 217 aa16.71■□□□□ 0.27
GPC1-202ENST00000420138 SOHLH1Q5JUK2 328 aa16.71■□□□□ 0.27
GPC1-202ENST00000420138 ACSM6Q6P461 480 aa16.71■□□□□ 0.27
GPC1-202ENST00000420138 LSM4Q9Y4Z0 139 aaKnown RBP16.71■□□□□ 0.27
GPC1-202ENST00000420138 TEX22C9J3V5 150 aa16.7■□□□□ 0.26
GPC1-202ENST00000420138 HSPB1P04792 205 aaKnown RBP16.7■□□□□ 0.26
GPC1-202ENST00000420138 SRP19P09132 144 aaKnown RBP16.7■□□□□ 0.26
GPC1-202ENST00000420138 P2RX4Q99571 388 aa16.7■□□□□ 0.26
GPC1-202ENST00000420138 MBP02144 154 aa16.7■□□□□ 0.26
GPC1-202ENST00000420138 HES1Q14469 280 aa16.7■□□□□ 0.26
GPC1-202ENST00000420138 LCN15Q6UWW0 184 aa16.7■□□□□ 0.26
GPC1-202ENST00000420138 SMCO4Q9NRQ5 59 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms