RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ATP6V0E1O15342 81 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TXNL1O43396 289 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 FCGR3BO75015 233 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 LY6G6DO95868 133 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 HLA-AP01891 365 aaKnown RBP4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 FRMD6-AS1P0C7T7 363 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 ANXA3P12429 323 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 SAA4P35542 130 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 KIR2DS2P43631 304 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 REG1BP48304 166 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TMEM187Q14656 261 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 SSX2Q16385 188 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TATDN3Q17R31 274 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 FAM120AOSQ5T036 256 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 LYG2Q86SG7 212 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 MOB3BQ86TA1 216 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 SPAG16Q8N0X2 631 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 DYNAPQ8N1N2 210 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TCTEX1D1Q8N7M0 179 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 OR52B4Q8NGK2 314 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 CD300LFQ8TDQ1 290 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 ZNF431Q8TF32 576 aaPredicted RBP4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 CASTOR1Q8WTX7 329 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 GLYATL2Q8WU03 294 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TMEM56Q96MV1 263 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 UHRF2Q96PU4 802 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TP53RKQ96S44 253 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 NABP2Q9BQ15 211 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 SEC22CQ9BRL7 303 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TMEM222Q9H0R3 208 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 GPN1Q9HCN4 374 aaPredicted RBP4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 FAM212BQ9NTI7 297 aaPredicted RBP4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 NUP50Q9UKX7 468 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 PRELID3BQ9Y3B1 194 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 ALG5Q9Y673 324 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TMEM56-RWDD3S4R434 201 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 TLN2Q9Y4G6 2542 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 A0A0B4J2A0 478 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 A0A0U1RQK1 487 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 C7orf66A4D0T2 115 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SMIM1B2RUZ4 78 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 H0Y980 276 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 RBFOX2O43251 390 aaKnown RBP eCLIP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 CREBL2O60519 120 aaPredicted RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 RAMP3O60896 148 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 DUS4LO95620 317 aaKnown RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 CDS2O95674 445 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 APOA2P02652 100 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SERPINE2P07093 398 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 OR5AC1P0C628 307 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 RRASP10301 218 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 RPA2P15927 270 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 UCP1P25874 307 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 PAX6P26367 422 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 CD1BP29016 333 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 LPAR6P43657 344 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 ARHGDIBP52566 201 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 LINC01547P58512 204 aaPredicted RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SRPXP78539 464 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 CBX3Q13185 183 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SLC9A3R2Q15599 337 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 RTL8BQ17RB0 113 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 ANKRD55Q3KP44 614 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SP6Q3SY56 376 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 OR2B11Q5JQS5 317 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SELENOHQ8IZQ5 122 aaKnown RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 C12orf45Q8N5I9 185 aaPredicted RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 OR4S2Q8NH73 311 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 COQ8AQ8NI60 647 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 MITD1Q8WV92 249 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 PHB2Q99623 299 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SMR3AQ99954 134 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 OR51J1Q9H342 316 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SLC35D1Q9NTN3 355 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SHPKQ9UHJ6 478 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 WASHC3Q9Y3C0 194 aa4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SOX21Q9Y651 276 aaPredicted RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 SETXQ7Z333 2677 aaKnown RBP4.63□□□□□ -1.67
NIFKP3-201ENST00000417799 IGHV3-72A0A0B4J1Y9 119 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 PIGBOS1A0A0B4J2F0 54 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 A0A1B0GVG6 124 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 IFITM10A6NMD0 228 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 VGLL3A8MV65 326 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 H7C2Y5 167 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 SSNA1O43805 119 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 CRYZL1O95825 349 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 HPRT1P00492 218 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 IGKV1-39P01597 117 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 IGKV1-16P04430 117 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 IGKV1D-39P04432 117 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 FBP1P09467 338 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 SPP1P10451 314 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 HNF1AP20823 631 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 BRS3P32247 399 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 SRP14P37108 136 aaKnown RBP4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 RAB13P51153 203 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 DYNLT3P51808 116 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 EBI3Q14213 229 aa4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 LBHQ53QV2 105 aaPredicted RBP4.62□□□□□ -1.67
NIFKP3-201ENST00000417799 TMEM182Q6ZP80 229 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms