RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 C3orf56Q8N813 242 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 OR1L6Q8NGR2 347 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 MS4A10Q96PG2 267 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 SERTAD4Q9NUC0 356 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 HSPB7Q9UBY9 170 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 ZFHX3Q15911 3703 aa6.65□□□□□ -1.34
TRIM48-201ENST00000417545 TCRBV4S1A1TA0A5B7 111 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 NPIPB5A8MRT5 1133 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 H3BUA1 57 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 CORTO00230 105 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.35
TRIM48-201ENST00000417545 NPY1RP25929 384 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 CRIP2P52943 208 aaPredicted RBP6.65□□□□□ -1.35
TRIM48-201ENST00000417545 POLR2GP62487 172 aaKnown RBP eCLIP6.65□□□□□ -1.35
TRIM48-201ENST00000417545 MRGPRG-AS1Q2M3A8 158 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 C2orf68Q2NKX9 166 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 TTC9CQ8N5M4 171 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 C11orf44Q8N8P7 122 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 SLC24A4Q8NFF2 622 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 OR4D5Q8NGN0 318 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 MISP3Q96FF7 219 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 NMES1Q9C002 83 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 WNT10AQ9GZT5 417 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 ZC4H2Q9NQZ6 224 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 PSENENQ9NZ42 101 aa6.65□□□□□ -1.35
TRIM48-201ENST00000417545 RCL1Q9Y2P8 373 aaKnown RBP6.65□□□□□ -1.35
TRIM48-201ENST00000417545 A0A0G2JLM5 398 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 RPS10-NUDT3A0A1W2PQS6 291 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 A0A1W2PRX2 142 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 IGLC7A0M8Q6 106 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 E7EUB6 86 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 H3BP45 60 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 PITX3O75364 302 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 SCGB2A1O75556 95 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 OR2J3O76001 311 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 IGHG4P01861 327 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 PRH1P02810 166 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 IFNA4P05014 189 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 ELANEP08246 267 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 EGR2P11161 476 aaPredicted RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 NUP62P37198 522 aaPredicted RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 SSBP2P81877 361 aaPredicted RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 WT1-ASQ06250 92 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 FOXE3Q13461 319 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 SPANXN5Q5MJ07 72 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 OR2C3Q8N628 320 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 THAP6Q8TBB0 222 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 ASB13Q8WXK3 278 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 PINX1Q96BK5 328 aaKnown RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 RAB40CQ96S21 281 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 ZNF436Q9C0F3 470 aaPredicted RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 STRAPQ9Y3F4 350 aaKnown RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 F11RQ9Y624 299 aaKnown RBP6.64□□□□□ -1.35
TRIM48-201ENST00000417545 PLXNB1O43157 2135 aa6.64□□□□□ -1.35
TRIM48-201ENST00000417545 CGB1A6NKQ9 187 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 K7EPK0 472 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 MBPP02686 304 aaPredicted RBP6.63□□□□□ -1.35
TRIM48-201ENST00000417545 GIPP09681 153 aaPredicted RBP6.63□□□□□ -1.35
TRIM48-201ENST00000417545 CTRB1P17538 263 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 OPRK1P41145 380 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 CAV2P51636 162 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 PROK1P58294 105 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 RAP2BP61225 183 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 RHOGP84095 191 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 CD83Q01151 205 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 ATP5G2Q06055 141 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 FGL1Q08830 312 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 RAB32Q13637 225 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 AARDQ4LEZ3 155 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 ASPHD1Q5U4P2 390 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 CTRB2Q6GPI1 263 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 C10orf99Q6UWK7 81 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 Q6ZNX1 250 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 FAM223AQ8IWN6 122 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 OR11H7Q8NGC8 314 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 OR1P1Q8NH06 330 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 PPP1R1CQ8WVI7 109 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 P2RX4Q99571 388 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 FBXL7Q9UJT9 491 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 TSSC4Q9Y5U2 329 aaPredicted RBP6.63□□□□□ -1.35
TRIM48-201ENST00000417545 U3KQ87 197 aa6.63□□□□□ -1.35
TRIM48-201ENST00000417545 A0A1B0GW64 132 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 SCAF4O95104 1147 aaKnown RBP6.62□□□□□ -1.35
TRIM48-201ENST00000417545 RPLP1P05386 114 aaKnown RBP6.62□□□□□ -1.35
TRIM48-201ENST00000417545 CRYGCP07315 174 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 CD28P10747 220 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 CXCL3P19876 107 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 PPIFP30405 207 aaKnown RBP6.62□□□□□ -1.35
TRIM48-201ENST00000417545 RAB9AP51151 201 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 H2BFSP57053 126 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 DEFA5Q01523 94 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 ID3Q02535 119 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 EXOSC2Q13868 293 aaKnown RBP6.62□□□□□ -1.35
TRIM48-201ENST00000417545 NSUN5P1Q3KNT7 163 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 PDLIM3Q53GG5 364 aaPredicted RBP6.62□□□□□ -1.35
TRIM48-201ENST00000417545 OR8G2PQ6IF36 304 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 ETFRF1Q6IPR1 90 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms