RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 BUB1B-PAK6H3BSN5 160 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 NPFFO15130 113 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 RBFOX2O43251 390 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 TGOLN2O43493 480 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 NXPH3O95157 252 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 SCGB1D2O95969 90 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 IGKV1-16P04430 117 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 PCP4P48539 62 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 SULT1A2P50226 295 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 UBE2E1P51965 193 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 OR2B8PP59922 312 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 S100A10P60903 97 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 CXorf66Q5JRM2 361 aaPredicted RBP7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 TGIF2LXQ8IUE1 241 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 FOXRED2Q8IWF2 684 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 VKORC1L1Q8N0U8 176 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 UBAC2Q8NBM4 344 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 OR11H6Q8NGC7 330 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 OR4F5Q8NH21 305 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 SGMS2Q8NHU3 365 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 LSM10Q969L4 123 aaKnown RBP7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 NABP2Q9BQ15 211 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 HRH4Q9H3N8 390 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 FAM212BQ9NTI7 297 aaPredicted RBP7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 MDFIC2A0A1B0GVS7 189 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 ODF3BA8MYP8 253 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 PITX3O75364 302 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 MBP02144 154 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 ARG1P05089 322 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 PRRX1P54821 245 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 GAGE1Q13065 139 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 SHISA2Q6UWI4 295 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 MRPL52Q86TS9 123 aaKnown RBP7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 OR5AN1Q8NGI8 311 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 CD300LFQ8TDQ1 290 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 RRNAD1Q96FB5 475 aaKnown RBP7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 MISP3Q96FF7 219 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 ADTRPQ96IZ2 230 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 AQP10Q96PS8 301 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 PLEKHA2Q9HB19 425 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 MMP24Q9Y5R2 645 aa7.41□□□□□ -1.22
CHRNA1-206ENST00000416004 IGHV3-72A0A0B4J1Y9 119 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 A0A0U1RQK1 487 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 SRRM4A7MD48 611 aaKnown RBP7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 K7EPK0 472 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 PPP1R2P9O14990 202 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 HPRT1P00492 218 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 PET100P0DJ07 73 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 KIR2DS2P43631 304 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 SULT1A1P50225 295 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 MIDNQ504T8 468 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 FAM71F2Q6NXP2 309 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 FAM71E2Q8N5Q1 922 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 OR4S2Q8NH73 311 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 DCUN1D4Q92564 292 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 MAGT1Q9H0U3 335 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 SLC35D1Q9NTN3 355 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 RCL1Q9Y2P8 373 aaKnown RBP7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 NSG2Q9Y328 171 aa7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 LSM5Q9Y4Y9 91 aaKnown RBP7.4□□□□□ -1.23
CHRNA1-206ENST00000416004 TRAV3A0A0B4J244 114 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 A0A1B0GU03 582 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 CXorf65A6NEN9 183 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 FAM181BA6NEQ2 426 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 MSGN1A6NI15 193 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 DEDDO75618 318 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 YIF1AO95070 293 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 SNRNP70P08621 437 aaKnown RBP7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 OR9G9P0C7N8 305 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 LINC00614P0C842 121 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 SLC25A6P12236 298 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 FGF7P21781 194 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 IL3RAP26951 378 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 GAMTQ14353 236 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 PRSS54Q6PEW0 395 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 RITA1Q96K30 269 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 SPIN2AQ99865 258 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 SPIN2BQ9BPZ2 258 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 C11orf1Q9H5F2 150 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 DOK5Q9P104 306 aa7.39□□□□□ -1.23
CHRNA1-206ENST00000416004 A0A087WWC5 75 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 A0A1B0GW64 132 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 A0A1W2PPI3 338 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 A8MWP6 167 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 MED6O75586 246 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 HTR1DP28221 377 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 SAA4P35542 130 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 NKX2-1P43699 371 aaPredicted RBP7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 IER3P46695 156 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 ID3Q02535 119 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 TNFRSF9Q07011 255 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 RTL8BQ17RB0 113 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 TPTE2P1Q5T6R2 138 aa7.38□□□□□ -1.23
CHRNA1-206ENST00000416004 H2BFWTQ7Z2G1 175 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms