RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 Q9H3A6 140 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 UQCR10Q9UDW1 63 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 MYOFQ9NZM1 2061 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 LOXL4Q96JB6 756 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 SPCS1Q9Y6A9 102 aa15.59■□□□□ 0.09
SHANK3-202ENST00000414786 SERF2P84101 59 aa15.58■□□□□ 0.09
SHANK3-202ENST00000414786 A0A1W2PPC1 479 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 RHOGP84095 191 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 RNF182Q8N6D2 247 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 TMEM174Q8WUU8 243 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 GGTLC3B5MD39 225 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 UMODP07911 640 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 C8orf82Q6P1X6 216 aaPredicted RBP15.58■□□□□ 0.08
SHANK3-202ENST00000414786 NEU4Q8WWR8 484 aaPredicted RBP15.58■□□□□ 0.08
SHANK3-202ENST00000414786 PRADC1Q9BSG0 188 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 LHFPL6Q9Y693 200 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 V9GYH0 126 aa15.58■□□□□ 0.08
SHANK3-202ENST00000414786 CLPSL1A2RUU4 121 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 TMEM54Q969K7 222 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.57■□□□□ 0.08
SHANK3-202ENST00000414786 FNDC4Q9H6D8 234 aaPredicted RBP15.57■□□□□ 0.08
SHANK3-202ENST00000414786 ZIC4Q8N9L1 334 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 KLHL30-AS1Q8NEE0 82 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 PSMG3Q9BT73 122 aaPredicted RBP15.57■□□□□ 0.08
SHANK3-202ENST00000414786 MIR17HGQ75NE6 70 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 TOMM40O96008 361 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 CEACAM8P31997 349 aaPredicted RBP15.57■□□□□ 0.08
SHANK3-202ENST00000414786 RAG2P55895 527 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 SCAND1P57086 179 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 RCHY1Q96PM5 261 aa15.57■□□□□ 0.08
SHANK3-202ENST00000414786 IMMP1LQ96LU5 166 aa15.56■□□□□ 0.08
SHANK3-202ENST00000414786 CXCL2P19875 107 aa15.56■□□□□ 0.08
SHANK3-202ENST00000414786 ASCL2Q99929 193 aa15.56■□□□□ 0.08
SHANK3-202ENST00000414786 DDX60LQ5H9U9 1706 aaKnown RBP15.56■□□□□ 0.08
SHANK3-202ENST00000414786 ZXDCQ2QGD7 858 aaPredicted RBP15.56■□□□□ 0.08
SHANK3-202ENST00000414786 ACP7Q6ZNF0 438 aa15.56■□□□□ 0.08
SHANK3-202ENST00000414786 LINC00477Q96M19 166 aa15.56■□□□□ 0.08
SHANK3-202ENST00000414786 ANAPC10Q9UM13 185 aa15.56■□□□□ 0.08
SHANK3-202ENST00000414786 CD300EQ496F6 205 aaPredicted RBP15.56■□□□□ 0.08
SHANK3-202ENST00000414786 FANCMQ8IYD8 2048 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 A0A1B0GV90 55 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 TMEM91Q6ZNR0 172 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 SDHCQ99643 169 aaPredicted RBP15.55■□□□□ 0.08
SHANK3-202ENST00000414786 ZNF257Q9Y2Q1 563 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 TIAM2Q8IVF5 1701 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 CTDSPLO15194 276 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 OR52E5Q8NH55 327 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 A0A096LPF7 62 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 NDUFS5O43920 106 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 RAMP1O60894 148 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 SLC25A47Q6Q0C1 308 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 C17orf98A8MV24 154 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 RPL15P61313 204 aaKnown RBP15.55■□□□□ 0.08
SHANK3-202ENST00000414786 TMEM86BQ8N661 226 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 FAM181AQ8N9Y4 354 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 STAG3L3P0CL85 134 aa15.55■□□□□ 0.08
SHANK3-202ENST00000414786 TMEM8BA6NDV4 472 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 ZP1P60852 638 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 ZNF562Q6V9R5 426 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 NHP2Q9NX24 153 aaKnown RBP15.54■□□□□ 0.08
SHANK3-202ENST00000414786 ZNF114Q8NC26 417 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 GSN-AS1Q9NRJ2 163 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 HMGCLL1Q8TB92 370 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 NAPSAO96009 420 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 COQ2Q96H96 371 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 PRB2P02812 416 aaPredicted RBP15.54■□□□□ 0.08
SHANK3-202ENST00000414786 RND3P61587 244 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 CD300LDQ6UXZ3 194 aa15.54■□□□□ 0.08
SHANK3-202ENST00000414786 CCL1P22362 96 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 ATP5G3P48201 142 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 RNASE7Q9H1E1 156 aaKnown RBP15.53■□□□□ 0.08
SHANK3-202ENST00000414786 LAMB1P07942 1786 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 PAPPA2Q9BXP8 1791 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 THBDP07204 575 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 PTGDSP41222 190 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 DOCK2Q92608 1830 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 MT-ND6P03923 174 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 IGHV1-2P23083 117 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 IGFL4Q6B9Z1 124 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 C9orf106Q8NAJ2 232 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 TRAV8-4A0A0B4J246 113 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 MYOD1P15172 320 aa15.53■□□□□ 0.08
SHANK3-202ENST00000414786 FAM57AQ8TBR7 257 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 IFI27L2Q9H2X8 130 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 IGKV2-40A0A087WW87 121 aaPredicted RBP15.52■□□□□ 0.08
SHANK3-202ENST00000414786 DPRXA6NFQ7 191 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 IGKV2D-40P01614 121 aaPredicted RBP15.52■□□□□ 0.08
SHANK3-202ENST00000414786 FUT5Q11128 374 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 NPCDR1Q9BY65 106 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 CD160O95971 181 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 PAX1P15863 534 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 Q6ZT83 130 aa15.52■□□□□ 0.08
SHANK3-202ENST00000414786 CEP290O15078 2479 aa15.52■□□□□ 0.07
SHANK3-202ENST00000414786 TBR1Q16650 682 aa15.52■□□□□ 0.07
SHANK3-202ENST00000414786 OR5P3Q8WZ94 311 aa15.52■□□□□ 0.07
SHANK3-202ENST00000414786 TIMM23BQ5SRD1 257 aa15.51■□□□□ 0.07
SHANK3-202ENST00000414786 TCF23Q7RTU1 214 aa15.51■□□□□ 0.07
SHANK3-202ENST00000414786 IGHV2OR16-5A0A0B4J2B6 119 aa15.51■□□□□ 0.07
SHANK3-202ENST00000414786 GLRXP35754 106 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms