RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 FHL3Q13643 280 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 C4orf46Q504U0 113 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 FAM209BQ5JX69 171 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 NUDT15Q9NV35 164 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 THYN1Q9P016 225 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 CACNG5Q9UF02 275 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 IGLV11-55A0A075B6I3 123 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 A0A1B0GU03 582 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 REG1AP05451 166 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 ATP5G2Q06055 141 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 SMCO1Q147U7 214 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 ZNF343Q6P1L6 599 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 OR2C3Q8N628 320 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 ZNF114Q8NC26 417 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 DUSP18Q8NEJ0 188 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 OR1N2Q8NGR9 330 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
LINC00398-201ENST00000414407 F11RQ9Y624 299 aaKnown RBP12.75□□□□□ -0.37
LINC00398-201ENST00000414407 WNK1Q9H4A3 2382 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 OR2J3O76001 311 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 IGHV3-11P01762 117 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 HSPB1P04792 205 aaKnown RBP12.74□□□□□ -0.37
LINC00398-201ENST00000414407 H2AFB2P0C5Z0 115 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 ERHP84090 104 aaKnown RBP12.74□□□□□ -0.37
LINC00398-201ENST00000414407 ZNF616Q08AN1 781 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 DEFB136Q30KP8 78 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 C19orf35Q6ZS72 473 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 OR1P1Q8NH06 330 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 FBXL7Q9UJT9 491 aa12.74□□□□□ -0.37
LINC00398-201ENST00000414407 PKD1L1Q8TDX9 2849 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 OR8U8P0C7N1 319 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 C15orf32Q32M92 178 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 MITD1Q8WV92 249 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 RANGRFQ9HD47 186 aaPredicted RBP12.73□□□□□ -0.37
LINC00398-201ENST00000414407 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 DMRT1Q9Y5R6 373 aa12.73□□□□□ -0.37
LINC00398-201ENST00000414407 LINC01619G3V211 115 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 PITX3O75364 302 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 NDUFB8O95169 186 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 CD33P20138 364 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 DPF1Q92782 380 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 CXorf58Q96LI9 332 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 DUX3Q96PT4 197 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
LINC00398-201ENST00000414407 HSPB7Q9UBY9 170 aa12.72□□□□□ -0.37
LINC00398-201ENST00000414407 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.71□□□□□ -0.37
LINC00398-201ENST00000414407 ZP3P21754 424 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 SNCAP37840 140 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 HOXA1P49639 335 aaPredicted RBP12.71□□□□□ -0.37
LINC00398-201ENST00000414407 DEFA5Q01523 94 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.37
LINC00398-201ENST00000414407 GGNBP1Q5YKI7 109 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 SLC25A24Q6NUK1 477 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 VN1R17PQ8TDU5 208 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 ZNF431Q8TF32 576 aaPredicted RBP12.71□□□□□ -0.37
LINC00398-201ENST00000414407 EEF1AKMT3Q96AZ1 226 aa12.71□□□□□ -0.37
LINC00398-201ENST00000414407 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 A0A087WW49 117 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 TRBV7-1A0A0A6YYK4 115 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 IFNA21P01568 189 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 IL5P05113 134 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 HOXB5P09067 269 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 SUB1P53999 127 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00398-201ENST00000414407 MFAP2P55001 183 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 TNFRSF9Q07011 255 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 BSXQ3C1V8 233 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 SPINK9Q5DT21 86 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 PVRIGQ6DKI7 326 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 PLET1Q6UQ28 207 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 OR1S1Q8NH92 325 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 RCC1LQ96I51 464 aaKnown RBP12.7□□□□□ -0.38
LINC00398-201ENST00000414407 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 PALMDQ9NP74 551 aa12.7□□□□□ -0.38
LINC00398-201ENST00000414407 ANKRD34BA5PLL1 514 aa12.69□□□□□ -0.38
LINC00398-201ENST00000414407 HTR2BP41595 481 aa12.69□□□□□ -0.38
LINC00398-201ENST00000414407 OR52B4Q8NGK2 314 aa12.69□□□□□ -0.38
LINC00398-201ENST00000414407 MARVELD1Q9BSK0 173 aa12.69□□□□□ -0.38
LINC00398-201ENST00000414407 MCRIP2Q9BUT9 160 aaKnown RBP12.69□□□□□ -0.38
LINC00398-201ENST00000414407 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
LINC00398-201ENST00000414407 CEBPZOSA8MTT3 80 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 CORTO00230 105 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 PRAF2O60831 178 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 ADAP1O75689 374 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 ZNF502Q8TBZ5 544 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 CCDC140Q96MF4 163 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
LINC00398-201ENST00000414407 HEYLQ9NQ87 328 aaPredicted RBP12.68□□□□□ -0.38
LINC00398-201ENST00000414407 MFSD2BA6NFX1 497 aa12.67□□□□□ -0.38
LINC00398-201ENST00000414407 INMT-MINDY4F8WBC2 141 aa12.67□□□□□ -0.38
LINC00398-201ENST00000414407 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
LINC00398-201ENST00000414407 HOXD3P31249 432 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms