RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 DSCAML1Q8TD84 2053 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
NUB1-201ENST00000413040 RAB4BP61018 213 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 PRB3Q04118 309 aaPredicted RBP11.3□□□□□ -0.6
NUB1-201ENST00000413040 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 ZNF788Q6ZQV5 615 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
NUB1-201ENST00000413040 RPUSD1Q9UJJ7 312 aaKnown RBP11.3□□□□□ -0.6
NUB1-201ENST00000413040 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 AKAP13Q12802 2813 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 APELAP0DMC3 54 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 LCN2P80188 198 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 FXYD3Q14802 87 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 AARDQ4LEZ3 155 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 C10orf55Q5SWW7 151 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 ELOVL5Q9NYP7 299 aa11.3□□□□□ -0.6
NUB1-201ENST00000413040 ZNF705FA8MVS1 300 aaPredicted RBP11.29□□□□□ -0.6
NUB1-201ENST00000413040 UPK2O00526 184 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 ZNF705DP0CH99 300 aaPredicted RBP11.29□□□□□ -0.6
NUB1-201ENST00000413040 ZNF705BP0CI00 300 aaPredicted RBP11.29□□□□□ -0.6
NUB1-201ENST00000413040 ADMP35318 185 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 IER3P46695 156 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
NUB1-201ENST00000413040 TMPRSS3P57727 454 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 ASPHD1Q5U4P2 390 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 PQLC2Q6ZP29 291 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 Q6ZS92 163 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 OR10X1Q8NGY0 326 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 ATMQ13315 3056 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 NUPR1O60356 82 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 APOA2P02652 100 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
NUB1-201ENST00000413040 CORO2AQ92828 525 aa11.29□□□□□ -0.6
NUB1-201ENST00000413040 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
NUB1-201ENST00000413040 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 HELTA6NFD8 242 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 CRYABP02511 175 aaKnown RBP11.28□□□□□ -0.6
NUB1-201ENST00000413040 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
NUB1-201ENST00000413040 OR2T6Q8NHC8 308 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 MUC6Q6W4X9 2439 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 A0A1B0GV90 55 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 K7EN84 100 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
NUB1-201ENST00000413040 TYMSP04818 313 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 GNG4P50150 75 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 DIAPH2-AS1Q14236 149 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 OR8I2Q8N0Y5 310 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 SAP30LQ9HAJ7 183 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 TLN1Q9Y490 2541 aaKnown RBP11.28□□□□□ -0.6
NUB1-201ENST00000413040 FCN1O00602 326 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 PRRG2O14669 202 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 RNASE7Q9H1E1 156 aaKnown RBP11.28□□□□□ -0.6
NUB1-201ENST00000413040 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
NUB1-201ENST00000413040 TRAV5A0A0B4J249 113 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 C16orf97H3BN30 126 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 CEACAM4O75871 244 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 PLAUP00749 431 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 LINC00869P0C866 280 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 CD99P14209 185 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 GATA4P43694 442 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 FOXL1Q12952 345 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.6
NUB1-201ENST00000413040 TMEM144Q7Z5S9 345 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.6
NUB1-201ENST00000413040 MS4A10Q96PG2 267 aa11.27□□□□□ -0.6
NUB1-201ENST00000413040 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
NUB1-201ENST00000413040 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
NUB1-201ENST00000413040 REG1AP05451 166 aa11.27□□□□□ -0.61
NUB1-201ENST00000413040 DLX1P56177 255 aa11.27□□□□□ -0.61
NUB1-201ENST00000413040 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
NUB1-201ENST00000413040 ERHP84090 104 aaKnown RBP11.27□□□□□ -0.61
NUB1-201ENST00000413040 KIAA1644Q3SXP7 199 aa11.27□□□□□ -0.61
NUB1-201ENST00000413040 OR1L6Q8NGR2 347 aa11.27□□□□□ -0.61
NUB1-201ENST00000413040 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.61
NUB1-201ENST00000413040 RAI1Q7Z5J4 1906 aaPredicted RBP11.27□□□□□ -0.61
NUB1-201ENST00000413040 TM4SF5O14894 197 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 CCKARP32238 428 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 PRR20EP86478 221 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 PRR20CP86479 221 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 PRR20DP86480 221 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 PRR20BP86481 221 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 PRR20AP86496 221 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 BSPH1Q075Z2 132 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
NUB1-201ENST00000413040 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 BAGE3Q86Y29 109 aa11.26□□□□□ -0.61
NUB1-201ENST00000413040 BAGE2Q86Y30 109 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms